RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 KLRF1Q9NZS2 232 aa4.23□□□□□ -1.73
TCF4-215ENST00000562638 KCNS2Q9ULS6 477 aa4.23□□□□□ -1.73
TCF4-215ENST00000562638 VSIG4Q9Y279 399 aa4.23□□□□□ -1.73
TCF4-215ENST00000562638 IER3IP1Q9Y5U9 82 aa4.23□□□□□ -1.73
TCF4-215ENST00000562638 RALGAPA2Q2PPJ7 1873 aa4.23□□□□□ -1.73
TCF4-215ENST00000562638 LTBP3Q9NS15 1303 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 TRAV9-1A0A075B6T8 112 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 TRAV36DV7A0A075B6V5 113 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 A0A087WV48 116 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 KBTBD11-OT1A0A1B0GTJ5 212 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 C1orf226A1L170 272 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 C7orf71A4D174 169 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 FOXI3A8MTJ6 420 aaPredicted RBP4.22□□□□□ -1.73
TCF4-215ENST00000562638 TMEM250H0YL14 139 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 FCN1O00602 326 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 FFAR1O14842 300 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 HMGB3O15347 200 aaKnown RBP4.22□□□□□ -1.73
TCF4-215ENST00000562638 ST8SIA3O43173 380 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 SYNGR1O43759 233 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 PRICKLE3O43900 615 aaPredicted RBP4.22□□□□□ -1.73
TCF4-215ENST00000562638 FCN3O75636 299 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 MPIG6BO95866 241 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 CD3DP04234 171 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 HPNP05981 417 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 CD55P08174 381 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 CT45A10P0DMU9 189 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 IRF1P10914 325 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 HIST1H1CP16403 213 aaKnown RBP4.22□□□□□ -1.73
TCF4-215ENST00000562638 ZNF708P17019 499 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 IGFBP2P18065 325 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 FSTP19883 344 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 PRDX3P30048 256 aaKnown RBP4.22□□□□□ -1.73
TCF4-215ENST00000562638 S100A3P33764 101 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 PNPLA4P41247 253 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 TNFSF9P41273 254 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 GALR1P47211 349 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 OR1E2P47887 323 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 UQCRFS1P47985 274 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 STC1P52823 247 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 PCBP3P57721 371 aaKnown RBP4.22□□□□□ -1.73
TCF4-215ENST00000562638 TAS2R46P59540 309 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 CCL20P78556 96 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 ROM1Q03395 351 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 PDE7AQ13946 482 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 IL11RAQ14626 422 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 ZNF146Q15072 292 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 CPSF6Q16630 551 aaKnown RBP eCLIP4.22□□□□□ -1.73
TCF4-215ENST00000562638 POM121L1PQ3SYA9 428 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 Q6Q795 121 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 LCN15Q6UWW0 184 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 DHRS13Q6UX07 377 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 PLXDC2Q6UX71 529 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 Q6ZS92 163 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 Q6ZUT4 128 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 HFE2Q6ZVN8 426 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 MOB1BQ7L9L4 216 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 C16orf82Q7Z2V1 217 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 ERASQ7Z444 233 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 MDGA2Q7Z553 956 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 GPD1LQ8N335 351 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 ZNF615Q8N8J6 731 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 C8orf31Q8N9H6 132 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 OR10P1Q8NGE3 313 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 OR52E2Q8NGJ4 325 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 OR5H2Q8NGV7 314 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 OR2G3Q8NGZ4 309 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 ATP6V0E2Q8NHE4 81 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 PPTC7Q8NI37 304 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 ZNF563Q8TA94 476 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 OCC1Q8TAD7 63 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 VSTM2AQ8TAG5 236 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 SYNPRQ8TBG9 265 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 DDB2Q92466 427 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 DERL3Q96Q80 235 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 C16orf70Q9BSU1 422 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 SAMD10Q9BYL1 202 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 SMIM3Q9BZL3 60 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 NIF3L1Q9GZT8 377 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 NKX2-4Q9H2Z4 354 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 IL23AQ9NPF7 189 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 RPRMQ9NS64 109 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 WSB2Q9NYS7 404 aaPredicted RBP4.22□□□□□ -1.73
TCF4-215ENST00000562638 EHFQ9NZC4 300 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 TFCP2L1Q9NZI6 479 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 TAAR3PQ9P1P4 343 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 ST6GALNAC2Q9UJ37 374 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 RALYQ9UKM9 306 aaKnown RBP4.22□□□□□ -1.73
TCF4-215ENST00000562638 MED31Q9Y3C7 131 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 PTRH2Q9Y3E5 179 aaKnown RBP4.22□□□□□ -1.73
TCF4-215ENST00000562638 PLXNA1Q9UIW2 1896 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 MCM3APO60318 1980 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 ANKRD12Q6UB98 2062 aa4.22□□□□□ -1.73
TCF4-215ENST00000562638 XIRP1Q702N8 1843 aaKnown RBP4.21□□□□□ -1.74
TCF4-215ENST00000562638 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.21□□□□□ -1.74
TCF4-215ENST00000562638 A0A1W2PPM0 123 aa4.21□□□□□ -1.74
TCF4-215ENST00000562638 DPRXA6NFQ7 191 aa4.21□□□□□ -1.74
TCF4-215ENST00000562638 LIPT2A6NK58 231 aa4.21□□□□□ -1.74
TCF4-215ENST00000562638 ZNF736B4DX44 427 aaPredicted RBP4.21□□□□□ -1.74
TCF4-215ENST00000562638 EEF1E1-BLOC1S5C9J1V9 151 aa4.21□□□□□ -1.74
TCF4-215ENST00000562638 F8W1H4 67 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms