RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ZNF701M0R085 212 aaPredicted RBP7.91□□□□□ -1.14
CLK3-208ENST00000562626 WIPF1O43516 503 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 NOL3O60936 208 aaKnown RBP7.91□□□□□ -1.14
CLK3-208ENST00000562626 IGHV4-59P01825 116 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 RANBP1P43487 201 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 HLA-DRB5Q30154 266 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 MORN2Q502X0 79 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 CT45A1Q5HYN5 189 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 TMEM69Q5SWH9 247 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 CNIH2Q6PI25 160 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 Q6YL49 198 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 OR10A7Q8NGE5 316 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 OR52M1Q8NGK5 317 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 OR9G1Q8NH87 305 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 CT45A3Q8NHU0 189 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 ZNF596Q8TC21 504 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 PIFOQ8TCI5 191 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 IL1F10Q8WWZ1 152 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 ACOT12Q8WYK0 555 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 S100A16Q96FQ6 103 aaKnown RBP7.91□□□□□ -1.14
CLK3-208ENST00000562626 OR2S2Q9NQN1 319 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 TNFRSF19Q9NS68 423 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 A0A0A6YYH2 397 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 SMIM31A0A1B0GVY4 71 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 A6NJ64 397 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 TRDCB7Z8K6 153 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 BUB1B-PAK6H3BSN5 160 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 FABP7O15540 132 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 SPINT2O43291 252 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 HOXA3O43365 443 aaPredicted RBP7.9□□□□□ -1.14
CLK3-208ENST00000562626 RAB13P51153 203 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 GNG2P59768 71 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 HILS1P60008 231 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 SLC9A3R2Q15599 337 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 FAM189A2Q15884 450 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 SSX2Q16385 188 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 PNLIPRP3Q17RR3 467 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 MIDNQ504T8 468 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 RNASE12Q5GAN4 147 aaKnown RBP7.9□□□□□ -1.14
CLK3-208ENST00000562626 OR52W1Q6IF63 320 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 TRAT1Q6PIZ9 186 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 MOB1BQ7L9L4 216 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 ZNF554Q86TJ5 538 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 ODF3L1Q8IXM7 274 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 TEX29Q8N6K0 151 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 BEND2Q8NDZ0 799 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 MCFD2Q8NI22 146 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 SNAPC3Q92966 411 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 CMTM3Q96MX0 182 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 ABHD1Q96SE0 405 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 MMP28Q9H239 520 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 RIMS4Q9H426 269 aaPredicted RBP7.9□□□□□ -1.14
CLK3-208ENST00000562626 DIABLOQ9NR28 239 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 KCNIP1Q9NZI2 227 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 GNG12Q9UBI6 72 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 EXTL2Q9UBQ6 330 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 HILPDAQ9Y5L2 63 aa7.9□□□□□ -1.14
CLK3-208ENST00000562626 FAM25AB3EWG3 89 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 FAM25CB3EWG5 89 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 FAM25GB3EWG6 89 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 ST8SIA5O15466 376 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 RGS5O15539 181 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 SCGNO76038 276 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 DTYMKP23919 212 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 CD24P25063 80 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 SOX6P35712 828 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 IER3P46695 156 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 BPIFB3P59826 476 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 HTD2P86397 168 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 TPTE2P1Q5T6R2 138 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 MZT2AQ6P582 158 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 Q6ZS49 121 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 SLC25A48Q6ZT89 311 aaKnown RBP7.89□□□□□ -1.15
CLK3-208ENST00000562626 SNX29P2Q8IUI4 249 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 LINC00311Q8N616 119 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 AP3S1Q92572 193 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 ST6GALNAC6Q969X2 333 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 GALMQ96C23 342 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 C5orf30Q96GV9 206 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 CABLES2Q9BTV7 478 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 ST6GALNAC5Q9BVH7 336 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 C6orf62Q9GZU0 229 aaPredicted RBP7.89□□□□□ -1.15
CLK3-208ENST00000562626 C11orf54Q9H0W9 315 aaPredicted RBP7.89□□□□□ -1.15
CLK3-208ENST00000562626 MEGF9Q9H1U4 602 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 SLC23A1Q9UHI7 598 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 JPT1Q9UK76 154 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 ANAPC10Q9UM13 185 aa7.89□□□□□ -1.15
CLK3-208ENST00000562626 MRPS7Q9Y2R9 242 aaKnown RBP7.89□□□□□ -1.15
CLK3-208ENST00000562626 TBL2Q9Y4P3 447 aaKnown RBP7.89□□□□□ -1.15
CLK3-208ENST00000562626 TET2Q6N021 2002 aaPredicted RBP7.88□□□□□ -1.15
CLK3-208ENST00000562626 TRBV6-7A0A0A0MS04 114 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 A0A1W2PPI3 338 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 H3BUX3 64 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 TOR1AO14656 332 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 BET1O15155 118 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 TCF21O43680 179 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 YPEL1O60688 119 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 PROP1O75360 226 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 FBP1P09467 338 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 HTR1DP28221 377 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms