RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 NXPH3O95157 252 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 TYMSP04818 313 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 RRADP55042 308 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 PRAMEF20Q5VT98 475 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 FAM57BQ71RH2 274 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 ABHD12BQ7Z5M8 362 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 ZNF709Q8N972 641 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 RNF133Q8WVZ7 376 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 FAM71F1Q96KD3 344 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 HSPB9Q9BQS6 159 aa12.06□□□□□ -0.48
GTF3C1-203ENST00000562609 FOXI3A8MTJ6 420 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 MSTNO14793 375 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 GALR2O43603 387 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 CIDEAO60543 219 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 UBE2NP61088 152 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 ZNF726P1Q15940 193 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 KIAA2026Q5HYC2 2103 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 SLC24A4Q8NFF2 622 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 OR4C5Q8NGB2 326 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 MED29Q9NX70 200 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 TRAV39A0A0B4J263 110 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 GRIFINA4D1Z8 144 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 CDS2O95674 445 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 TMEM50AO95807 157 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 OPRM1P35372 400 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 SGCBQ16585 318 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 UNQ5815/PRO19632Q6UWF5 114 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 SLAMF6Q96DU3 332 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 ZNF845Q96IR2 970 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 RSG1Q9BU20 258 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 EMC6Q9BV81 110 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 PATZ1Q9HBE1 687 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 RPH3ALQ9UNE2 315 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 EXPH5Q8NEV8 1989 aa12.05□□□□□ -0.48
GTF3C1-203ENST00000562609 LOC400499M0QZD8 3231 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 KBTBD11O94819 623 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 TPPP2P59282 170 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 MRGPRGQ86SM5 289 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 C1orf210Q8IVY1 113 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 ATP5SQ99766 215 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 PLEKHJ1Q9NW61 149 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 LAMTOR2Q9Y2Q5 125 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 A0A1W2PNV4 684 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 PLPP3O14495 311 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 EFNA2O43921 213 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 TOMM40O96008 361 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 IL3RAP26951 378 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 C17orf67Q0P5P2 114 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 WDR5BQ86VZ2 330 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 OR2V1Q8NHB1 315 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 AGMATQ9BSE5 352 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 METTL7AQ9H8H3 244 aa12.04□□□□□ -0.48
GTF3C1-203ENST00000562609 IGKV1D-43A0A0B4J1Z2 117 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 A0A0U1RQK1 487 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 ZNF320A2RRD8 509 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 VSTM2BA6NLU5 285 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 TMEM238C9JI98 176 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 RPL15P61313 204 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 ZXDAP98168 799 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 LINC01551Q86U37 167 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 ZNF738Q8NE65 137 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 OR5T1Q8NG75 326 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 NAT6Q93015 286 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 WIPI2Q9Y4P8 454 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 TNRC6BQ9UPQ9 1833 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 G3V3Y1 287 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 POU3F1Q03052 451 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 EXT1Q16394 746 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 FAM78BQ5VT40 261 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 KCNIP4Q6PIL6 250 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 PGAM5Q96HS1 289 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 TXN2Q99757 166 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 DEFB126Q9BYW3 111 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 NECAP2Q9NVZ3 263 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 COX11Q9Y6N1 276 aa12.03□□□□□ -0.48
GTF3C1-203ENST00000562609 TRAV34A0A0B4J273 112 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 IGKV1-9A0A0C4DH69 117 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 MS4A18H0YCH9 400 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 ZNF737O75373 536 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 DXOO77932 396 aaKnown RBP12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 IFNA1P01562 189 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 SRP14P37108 136 aaKnown RBP12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 CLDN17P56750 224 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 MS4A18Q3C1V0 323 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 FBLN7Q53RD9 439 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 Q6ZN92 141 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 Q8NFD4 153 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 PLPPR1Q8TBJ4 325 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 APH1AQ96BI3 265 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 ANAPC16Q96DE5 110 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 PLK3Q9H4B4 646 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 SEPSECSQ9HD40 501 aaKnown RBP12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 SLC45A2Q9UMX9 530 aa12.02□□□□□ -0.48
GTF3C1-203ENST00000562609 A0A1W2PNR3 127 aa12.02□□□□□ -0.49
GTF3C1-203ENST00000562609 MT-ATP6P00846 226 aa12.02□□□□□ -0.49
GTF3C1-203ENST00000562609 IFNA5P01569 189 aa12.02□□□□□ -0.49
GTF3C1-203ENST00000562609 BAXQ07812 192 aa12.02□□□□□ -0.49
GTF3C1-203ENST00000562609 MBD3L1Q8WWY6 194 aa12.02□□□□□ -0.49
GTF3C1-203ENST00000562609 TMEM234Q8WY98 164 aa12.02□□□□□ -0.49
GTF3C1-203ENST00000562609 CSTL1Q9H114 145 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms