RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 DPM3Q9P2X0 92 aa13.29□□□□□ -0.28
USB1-206ENST00000562534 JPT1Q9UK76 154 aa13.29□□□□□ -0.28
USB1-206ENST00000562534 ADAM30Q9UKF2 790 aa13.29□□□□□ -0.28
USB1-206ENST00000562534 ELF5Q9UKW6 265 aaPredicted RBP13.29□□□□□ -0.28
USB1-206ENST00000562534 SVEP1Q4LDE5 3571 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 FAM172BPA6NC97 362 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 BUB1B-PAK6H3BSN5 160 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 SCTP09683 121 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 ZBTB25P24278 435 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 CBX5P45973 191 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 HILS1P60008 231 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 HLA-DRB3P79483 266 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 BAMBIQ13145 260 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 HLA-DRB5Q30154 266 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 Q6ZPA2 131 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 IZUMO1Q8IYV9 350 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 LINC00311Q8N616 119 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 OR4P4Q8NGL7 312 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 OR4A4PQ8NGN8 299 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 IL1F10Q8WWZ1 152 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 OCSTAMPQ9BR26 566 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 SLIRPQ9GZT3 109 aaKnown RBP13.28□□□□□ -0.28
USB1-206ENST00000562534 MMP28Q9H239 520 aa13.28□□□□□ -0.28
USB1-206ENST00000562534 AMMECR1Q9Y4X0 333 aaPredicted RBP13.28□□□□□ -0.28
USB1-206ENST00000562534 ANK3Q12955 4377 aaKnown RBP13.27□□□□□ -0.28
USB1-206ENST00000562534 IGHV3-43A0A0B4J1X8 118 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 CTDSP2O14595 271 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 DIRAS3O95661 229 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 IGHV3-43DP0DP04 118 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 TAS2R20P59543 309 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 AANATQ16613 207 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 LHFPL4Q7Z7J7 247 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 OR52L2PQ8NGH6 319 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 MCFD2Q8NI22 146 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 C15orf40Q8WUR7 153 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 LEAP2Q969E1 77 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 AJUBAQ96IF1 538 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 DPAGT1Q9H3H5 408 aa13.27□□□□□ -0.29
USB1-206ENST00000562534 ZNF230Q9UIE0 474 aaPredicted RBP13.27□□□□□ -0.29
USB1-206ENST00000562534 MRPS7Q9Y2R9 242 aaKnown RBP13.27□□□□□ -0.29
USB1-206ENST00000562534 OOSP1A8MZH6 123 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 FABP7O15540 132 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 HSPA12AO43301 675 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 IGHV3-7P01780 117 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 HLA-DQB1P01920 261 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 CTXN2P0C2S0 81 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 GSTT2P0CG29 244 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 GSTT2BP0CG30 244 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 PRSS3P35030 304 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 CEACAM6P40199 344 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 GNG10P50151 68 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 SSX2Q16385 188 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 UTF1Q5T230 341 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 C5orf24Q7Z6I8 188 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 PRIMA1Q86XR5 153 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 LDLRAD3Q86YD5 345 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 TMEM86BQ8N661 226 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 DTX3Q8N9I9 347 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 OR10X1Q8NGY0 326 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 NUDCD2Q8WVJ2 157 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 SSMEM1Q8WWF3 244 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 NXF2Q9GZY0 626 aaKnown RBP13.26□□□□□ -0.29
USB1-206ENST00000562534 MMP27Q9H306 513 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 GHITMQ9H3K2 345 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 POMT1Q9Y6A1 747 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 A3GALT2U3KPV4 340 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 MXRA5Q9NR99 2828 aa13.26□□□□□ -0.29
USB1-206ENST00000562534 SETD2Q9BYW2 2564 aaPredicted RBP13.26□□□□□ -0.29
USB1-206ENST00000562534 MDFIC2A0A1B0GVS7 189 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 LY6LH3BQJ8 138 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 CLDN34H7C241 214 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 SSX5O60225 188 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 IL3RAP26951 378 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 IER3P46695 156 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 ARHGDIBP52566 201 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 MADCAM1Q13477 382 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 CT45A1Q5HYN5 189 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 SLC25A48Q6ZT89 311 aaKnown RBP13.25□□□□□ -0.29
USB1-206ENST00000562534 OR10V1Q8NGI7 309 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 OR10J5Q8NHC4 309 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 CT45A3Q8NHU0 189 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 C17orf50Q8WW18 174 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 DCUN1D5Q9BTE7 237 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 C6orf62Q9GZU0 229 aaPredicted RBP13.25□□□□□ -0.29
USB1-206ENST00000562534 ZNRD1Q9P1U0 126 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 RABL2AQ9UBK7 228 aaPredicted RBP13.25□□□□□ -0.29
USB1-206ENST00000562534 EXTL2Q9UBQ6 330 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 SLC23A1Q9UHI7 598 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 RABL2BQ9UNT1 228 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 HILPDAQ9Y5L2 63 aa13.25□□□□□ -0.29
USB1-206ENST00000562534 A0A1W2PPE3 182 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 BTBD17A6NE02 478 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 VGLL3A8MV65 326 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 TRIM77I1YAP6 450 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 ITGB1BP1O14713 200 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 HOXA3O43365 443 aaPredicted RBP13.24□□□□□ -0.29
USB1-206ENST00000562534 VENTXO95231 258 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 PPP1CCP36873 323 aaKnown RBP13.24□□□□□ -0.29
USB1-206ENST00000562534 ZNF134P52741 427 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 LDLRAD2Q5SZI1 272 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms