RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 FAM24AA6NFZ4 105 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 OR8U9P0C7N5 309 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 SLC25A6P12236 298 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 MMP9P14780 707 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 LPAR6P43657 344 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 TDGF1P3P51864 188 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 VAMP2P63027 116 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 OR10Z1Q8NGY1 313 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 OR8U1Q8NH10 309 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 GALMQ96C23 342 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 GPR146Q96CH1 333 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 GINS3Q9BRX5 216 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 MS4A7Q9GZW8 240 aaPredicted RBP8.24□□□□□ -1.09
SMG1-205ENST00000561947 MAGT1Q9H0U3 335 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 LYRM2Q9NU23 88 aaPredicted RBP8.24□□□□□ -1.09
SMG1-205ENST00000561947 LIN7CQ9NUP9 197 aaKnown RBP8.24□□□□□ -1.09
SMG1-205ENST00000561947 A0A1B0GU03 582 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 IGSF23A1L1A6 192 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 A8MXE2 369 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 PITX3O75364 302 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 HBZP02008 142 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 APOC3P02656 99 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 EGR1P18146 543 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 GABRA2P47869 451 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 KLF3P57682 345 aaPredicted RBP8.23□□□□□ -1.09
SMG1-205ENST00000561947 BLOC1S1P78537 153 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 PJVKQ0ZLH3 352 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 KRBOX4Q5JUW0 171 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 C1QTNF12Q5T7M4 302 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 DRAM1Q8N682 238 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 NARS2Q96I59 477 aaKnown RBP8.23□□□□□ -1.09
SMG1-205ENST00000561947 TOLLIPQ9H0E2 274 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 PLEKHF2Q9H8W4 249 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 COQ3Q9NZJ6 369 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 SRRM5B3KS81 715 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 IGKV1-39P01597 117 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 IGKV1D-39P04432 117 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 SEC11BP0C7V7 166 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 EPHA1P21709 976 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 IL2RGP31785 369 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 CAV2P51636 162 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 SPACA3Q8IXA5 215 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 CD177Q8N6Q3 437 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 LSM10Q969L4 123 aaKnown RBP8.23□□□□□ -1.09
SMG1-205ENST00000561947 SLC25A31Q9H0C2 315 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 HRH4Q9H3N8 390 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 PARP11Q9NR21 331 aa8.23□□□□□ -1.09
SMG1-205ENST00000561947 FAM212BQ9NTI7 297 aaPredicted RBP8.23□□□□□ -1.09
SMG1-205ENST00000561947 BSNQ9UPA5 3926 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 IGLV3-9A0A075B6K5 115 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 TMEM218A2RU14 115 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 RNF212BA8MTL3 300 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 ATP6V1G2-DDX39BF2Z307 99 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 WRBO00258 174 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 PRRG2O14669 202 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 SPP1P10451 314 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 BMP5P22003 454 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 CFHR2P36980 270 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 PAX5Q02548 391 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 FAM27E3Q08E93 113 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 VHLLQ6RSH7 139 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 FAM90A1Q86YD7 464 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 DOLPP1Q86YN1 238 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 TMEM252Q8N6L7 170 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 ZNF645Q8N7E2 425 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 Q8NA96 180 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 ZBTB34Q8NCN2 500 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 OR52L2PQ8NGH6 319 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 RNASE11Q8TAA1 199 aaKnown RBP8.22□□□□□ -1.09
SMG1-205ENST00000561947 MRGPRDQ8TDS7 321 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 TMEM171Q8WVE6 324 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 LURAP1Q96LR2 239 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 COL25A1Q9BXS0 654 aaPredicted RBP8.22□□□□□ -1.09
SMG1-205ENST00000561947 ABCD4O14678 606 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 SIGLEC5O15389 551 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 NXPH3O95157 252 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 PRDX2P32119 198 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 GLIPR1P48060 266 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 AKR1C2P52895 323 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 RPS23P62266 143 aaKnown RBP8.22□□□□□ -1.09
SMG1-205ENST00000561947 AKR1C1Q04828 323 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 ZNF585BQ52M93 769 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 BTNL8Q6UX41 500 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 Q6ZRG5 221 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 CISD2Q8N5K1 135 aaKnown RBP8.22□□□□□ -1.09
SMG1-205ENST00000561947 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.22□□□□□ -1.09
SMG1-205ENST00000561947 MEGF10Q96KG7 1140 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 OR2V2Q96R30 315 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 SEBOXQ9HB31 216 aaPredicted RBP8.22□□□□□ -1.09
SMG1-205ENST00000561947 RNF115Q9Y4L5 304 aa8.22□□□□□ -1.09
SMG1-205ENST00000561947 LAMA5O15230 3695 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 A0A0G2JNJ9 132 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 CHST1O43916 411 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 ZNF737O75373 536 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 TMEM50AO95807 157 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 SRSF3P84103 164 aaKnown RBP8.21□□□□□ -1.09
SMG1-205ENST00000561947 TBR1Q16650 682 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 SWI5Q1ZZU3 235 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 MRGPRGQ86SM5 289 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 ODF3L1Q8IXM7 274 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms