RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-208	ENST00000561271	TPRKB	Q9Y3C4	175 aa		13.62	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	ERICH4	A6NGS2	130 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	ZNF736	B4DX44	427 aa	Predicted RBP	13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	RGS10	O43665	173 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	PF4	P02776	101 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	GLA	P06280	429 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	UCHL1	P09936	223 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	CHAT	P28329	748 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	ZNF134	P52741	427 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	UNC119	Q13432	240 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	EBI3	Q14213	229 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	TMEM30B	Q3MIR4	351 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271		Q3ZCU0	254 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	CT45A1	Q5HYN5	189 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	C1orf100	Q5SVJ3	147 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	TGIF2LX	Q8IUE1	241 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271		Q8N6K4	173 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	CT45A3	Q8NHU0	189 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	CCDC90B	Q9GZT6	254 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	DUSP21	Q9H596	190 aa		13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	MBNL3	Q9NUK0	354 aa	Known RBP	13.61	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	SERPINE3	A8MV23	424 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	SRM	P19623	302 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	CD33	P20138	364 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	HTR2C	P28335	458 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	ZNF137P	P52743	207 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	RPS27A	P62979	156 aa	Known RBP	13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	IZUMO2	Q6UXV1	221 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	C6orf201	Q7Z4U5	140 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	SLC35E3	Q7Z769	313 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	OR52L2P	Q8NGH6	319 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	OR2T10	Q8NGZ9	312 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	PHF21A	Q96BD5	680 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	NEDD4L	Q96PU5	975 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	OR2S2	Q9NQN1	319 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	KCNIP1	Q9NZI2	227 aa		13.6	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	NCBP2L	A6PVI3	153 aa	Known RBP	13.59	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	SLC22A1	O15245	554 aa		13.59	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	TXNL1	O43396	289 aa		13.59	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	PPP1CC	P36873	323 aa	Known RBP	13.59	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	MAP2K4	P45985	399 aa		13.59	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	P2RY14	Q15391	338 aa		13.59	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	TMEM91	Q6ZNR0	172 aa		13.59	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	OR6M1	Q8NGM8	313 aa		13.59	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	GFI1	Q99684	422 aa		13.59	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	FAAP24	Q9BTP7	215 aa		13.59	□□□□□ -0.23
CDC42BPB-208	ENST00000561271	ABHD14A	Q9BUJ0	271 aa		13.59	□□□□□ -0.23
CDC42BPB-208	ENST00000561271		A0A0A6YYD4	124 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	LINC01548	A6NM66	108 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	TMEM14DP	A8MWL7	114 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	BPNT1	O95861	308 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	MOS	P00540	346 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	IGHG2	P01859	326 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	IGLL1	P15814	213 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	CRHBP	P24387	322 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	CD1B	P29016	333 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	QRFP	P83859	136 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	MLLT11	Q13015	90 aa	Predicted RBP	13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	TPBG	Q13641	420 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	MORN2	Q502X0	79 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271		Q6ZPA2	131 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	FOXRED2	Q8IWF2	684 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271		Q8N9W7	124 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	KCNG3	Q8TAE7	436 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	CHPT1	Q8WUD6	406 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	TM2D1	Q9BX74	207 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	VCX3B	Q9H321	246 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	PLGRKT	Q9HBL7	147 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	LIN7C	Q9NUP9	197 aa	Known RBP	13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	JPT1	Q9UK76	154 aa		13.58	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	CPE	P16870	476 aa		13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	GPR12	P47775	334 aa		13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	RPL23A	P62750	156 aa	Known RBP	13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	LSAMP	Q13449	338 aa		13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	HMGN3	Q15651	99 aa		13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	C18orf65	Q6ZTR6	163 aa		13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	PRSS48	Q7RTY5	328 aa		13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	ZNF554	Q86TJ5	538 aa		13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	STPG2	Q8N412	459 aa		13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	SVOP	Q8N4V2	548 aa		13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	CNBD2	Q96M20	576 aa		13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	AK6	Q9Y3D8	172 aa	Known RBP	13.57	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	LANCL1	O43813	399 aa		13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	BLVRB	P30043	206 aa	Predicted RBP	13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	ETV3L	Q6ZN32	361 aa		13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	ODF3L1	Q8IXM7	274 aa		13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	SETD6	Q8TBK2	473 aa		13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	IL1F10	Q8WWZ1	152 aa		13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	S1PR3	Q99500	378 aa		13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	MRPL20	Q9BYC9	149 aa	Known RBP	13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	LPAR5	Q9H1C0	372 aa		13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	ABCG5	Q9H222	651 aa		13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	ISYNA1	Q9NPH2	558 aa		13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	PLSCR3	Q9NRY6	295 aa		13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	NECAP2	Q9NVZ3	263 aa		13.56	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	SLC17A2	O00624	439 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	ARL6IP5	O75915	188 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	NAPSA	O96009	420 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	CD37	P11049	281 aa		13.55	□□□□□ -0.24

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