RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 PMCHL1Q16048 86 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 C16orf82Q7Z2V1 217 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 CALHM1Q8IU99 346 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 IL17BQ9UHF5 180 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 A0A1W2PPV9 198 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 GCGP01275 180 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 CD82P27701 267 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 C1QTNF12Q5T7M4 302 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 MIEN1Q9BRT3 115 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 OR51B2Q9Y5P1 312 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 A0A1W2PRD5 423 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 A0A1W2PRF3 423 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 A0A1W2PRM7 423 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 CDX4O14627 284 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 NMBP08949 121 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 CCL3P10147 92 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 MMDQ15546 238 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 C12orf54Q6X4T0 127 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 MS4A7Q9GZW8 240 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 TMEM140Q9NV12 185 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM186AA6NE01 2351 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A10PA6NDY2 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A18PA6NE21 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A16PA6NEW6 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A20PA6NIJ5 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A8PA6NJQ4 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A7PA6NKC0 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A22PA8MWA6 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A12PA8MX19 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A5PA8MXJ8 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A23PA8MXZ1 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 H0Y980 276 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 DXOO77932 396 aaKnown RBP11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 HLA-DQA1P01909 254 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A15PP0C7V4 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A13PP0C7W8 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A14PP0C7W9 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM90A24PP0C7X0 464 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 TEX30Q5JUR7 227 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 CYB561D1Q8N8Q1 229 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 MC5RP33032 325 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 RPL31P62899 125 aaKnown RBP11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 RTP5Q14D33 572 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 PQLC2Q6ZP29 291 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 ABHD3Q8WU67 409 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 UCN2Q96RP3 112 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 MEF2BQ02080 365 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 OR4B1Q8NGF8 309 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 OR1N2Q8NGR9 330 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 P2RX4Q99571 388 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 KLK13Q9UKR3 277 aa11.5□□□□□ -0.57
CSPG4P11-201ENST00000560634 ERASQ7Z444 233 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 DIRC2Q96SL1 478 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 ELOVL1Q9BW60 279 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 WIPI2Q9Y4P8 454 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 C16orf97H3BN30 126 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 MUC1P15941 1255 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 HSF4Q9ULV5 492 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 GPR132Q9UNW8 380 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 H3BVH4 76 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 K7N7A8 449 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 PRDX2P32119 198 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 WNT5AP41221 380 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 RPL27AP46776 148 aaKnown RBP11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 ZNF137PP52743 207 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 AESQ08117 197 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 C1orf53Q5VUE5 145 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 GPA33Q99795 319 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 RABAC1Q9UI14 185 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 KCNK7Q9Y2U2 307 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 MRPS18BQ9Y676 258 aaKnown RBP11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 PXMP4Q9Y6I8 212 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 PPIAL4EA0A075B759 164 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 PPIAL4DF5H284 164 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 SIAH2O43255 324 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 CA2P00918 260 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 HLA-DQB1P01920 261 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 PPIAL4FP0DN26 164 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 NANOS3P60323 173 aaKnown RBP11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 FGF12P61328 243 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 FAM209AQ5JX71 171 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 OR2I1PQ8NGU4 316 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 TMEM70Q9BUB7 260 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 AKAP11Q9UKA4 1901 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 PPIAL4AQ9Y536 164 aa11.49□□□□□ -0.57
CSPG4P11-201ENST00000560634 NHSQ6T4R5 1651 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 HRKO00198 91 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 ZNF205O95201 554 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 NAT2P11245 290 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 TWIST1Q15672 202 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 CEACAM21Q3KPI0 293 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 PCM1Q15154 2024 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 BTF3P20290 206 aaKnown RBP11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 FCARP24071 287 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 PPP1CCP36873 323 aaKnown RBP11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 CEBPDP49716 269 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 PLPPR5Q32ZL2 321 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 C10orf111Q8N326 155 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 OR1K1Q8NGR3 316 aa11.48□□□□□ -0.57
CSPG4P11-201ENST00000560634 TMEM222Q9H0R3 208 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms