RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ZNF714Q96N38 554 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 SOSTQ9BQB4 213 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 RTN4RQ9BZR6 473 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 WIPI2Q9Y4P8 454 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 CAPZBP47756 277 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 SKP2Q13309 424 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 MMP16P51512 607 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 GVQW1Q8N7I0 195 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 KLK10O43240 276 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 GDF9O60383 454 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 ADAP1O75689 374 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 BCL2P10415 239 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 TMEM170BQ5T4T1 132 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 OR52M1Q8NGK5 317 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 EAF1Q96JC9 268 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 RNF122Q9H9V4 155 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 AURKAIP1Q9NWT8 199 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 SELENOPP49908 381 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 ASB16Q96NS5 453 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 TXNDC17Q9BRA2 123 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 SLC25A37Q9NYZ2 338 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 TMEM202A6NGA9 273 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 LHFPL5Q8TAF8 219 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 SYT11Q9BT88 431 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 CGB1A6NKQ9 187 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 ANKRD34AQ69YU3 496 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 CCL26Q9Y258 94 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 HEATR5BQ9P2D3 2071 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 GABRG2P18507 467 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 NEU1Q99519 415 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 PXMP4Q9Y6I8 212 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 NKX2-8O15522 239 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF117Q03924 483 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 TMEM249Q2WGJ8 235 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 TSPO2Q5TGU0 170 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 LILRA3Q8N6C8 439 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 OR1K1Q8NGR3 316 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 PTP4A1Q93096 173 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 SLIRPQ9GZT3 109 aaKnown RBP12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 KLK15Q9H2R5 256 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 HMX2A2RU54 273 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 KLF9Q13886 244 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 WIPI1Q5MNZ9 446 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 IL36RNQ9UBH0 155 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 TBL2Q9Y4P3 447 aaKnown RBP12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 NUP98P52948 1817 aa12.17□□□□□ -0.46
CSPG4P12-202ENST00000559989 OTX1P32242 354 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF345Q14585 488 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF793Q6ZN11 406 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 SPNS2Q8IVW8 549 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 PPYP01298 95 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 MC5RP33032 325 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 NXT2Q9NPJ8 142 aaKnown RBP12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 SDK1Q7Z5N4 2213 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 OVCH2Q7RTZ1 564 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 OR11H12B2RN74 326 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 TRGC2P03986 189 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 OR11H1Q8NG94 326 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 OR11H2Q8NH07 326 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF414Q96IQ9 312 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 IL20Q9NYY1 176 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 A0A1W2PR80 420 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 FAM106CPP0CH98 169 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 SH2D5Q6ZV89 423 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 CLDN16Q9Y5I7 305 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 SPCS1Q9Y6A9 102 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 MYOM1P52179 1685 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 H7C1H1 209 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 TFPI2P48307 235 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 RPS4XP62701 263 aaKnown RBP12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 LHX8Q68G74 356 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 DUX5Q96PT3 197 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 MS4A7Q9GZW8 240 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 TIAM2Q8IVF5 1701 aa12.16□□□□□ -0.46
CSPG4P12-202ENST00000559989 A0A0A6YYD5 115 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 RRHO14718 337 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 IGF2P01344 180 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 KRTCAP3Q53RY4 240 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 TMEM177Q53S58 311 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 C10orf111Q8N326 155 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 COL2A1P02458 1487 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 C4AP0C0L4 1744 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 FFAR1O14842 300 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 NAAAQ02083 359 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 CCL7P80098 99 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 CCL27Q9Y4X3 112 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF562Q6V9R5 426 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 CYB561D1Q8N8Q1 229 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 OR5AN1Q8NGI8 311 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 MEX3AA1L020 520 aaKnown RBP12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 CFAP161Q6P656 301 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 OR2Y1Q8NGV0 311 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 RNF7Q9UBF6 113 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 DMRT1Q9Y5R6 373 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF600Q6ZNG1 722 aa12.15□□□□□ -0.46
CSPG4P12-202ENST00000559989 NDUFB4O95168 129 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 MBNL2Q5VZF2 373 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms