RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 NKAPLQ5M9Q1 402 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 VAX1Q5SQQ9 334 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 AHSA2Q719I0 299 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 OR5M8Q8NGP6 311 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 GALMQ96C23 342 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 DERL3Q96Q80 235 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 ZNF251Q9BRH9 671 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 MND1Q9BWT6 205 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 CHMP1AQ9HD42 196 aaPredicted RBP9.93□□□□□ -0.82
SNX1-209ENST00000559961 SCN3BQ9NY72 215 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 RCC2Q9P258 522 aaKnown RBP9.93□□□□□ -0.82
SNX1-209ENST00000559961 KIAA1456Q9P272 454 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 STEAP1Q9UHE8 339 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 KIAA2026Q5HYC2 2103 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 PDCD6O75340 191 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 LALBAP00709 142 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 ADARB1P78563 741 aaKnown RBP9.92□□□□□ -0.82
SNX1-209ENST00000559961 DGCR2P98153 550 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 RCN1Q15293 331 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 MMDQ15546 238 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 LCNL1Q6ZST4 164 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 OR2AK2Q8NG84 335 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 OR1L1Q8NH94 360 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 FAM46BQ96A09 425 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 PGLYRP3Q96LB9 341 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 ABHD14AQ9BUJ0 271 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 PLCXD1Q9NUJ7 323 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 ZNF581Q9P0T4 197 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 PSORS1C1Q9UIG5 152 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 ZNF107Q9UII5 783 aaPredicted RBP9.92□□□□□ -0.82
SNX1-209ENST00000559961 JPT1Q9UK76 154 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 DSCAML1Q8TD84 2053 aa9.92□□□□□ -0.82
SNX1-209ENST00000559961 ERICH4A6NGS2 130 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 H0YHG0 523 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 K7EIL1 84 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 LANCL1O43813 399 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 CDX1P47902 265 aaPredicted RBP9.91□□□□□ -0.82
SNX1-209ENST00000559961 RPS11P62280 158 aaKnown RBP eCLIP9.91□□□□□ -0.82
SNX1-209ENST00000559961 GABPB1Q06547 395 aaPredicted RBP9.91□□□□□ -0.82
SNX1-209ENST00000559961 EGFEM1PQ0D2K5 195 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 KIR2DS1Q14954 304 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 ACSM3Q53FZ2 586 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 CT45A1Q5HYN5 189 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 C9orf66Q5T8R8 295 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 NANOGP1Q8N7R0 232 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 Q8N9W7 124 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 CT45A3Q8NHU0 189 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 KCNG3Q8TAE7 436 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 SETD6Q8TBK2 473 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 ST6GALNAC6Q969X2 333 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 Q96M66 194 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 DCLRE1BQ9H816 532 aa9.91□□□□□ -0.82
SNX1-209ENST00000559961 NOTCH3Q9UM47 2321 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 MAGEA13PA6NCF6 341 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 PTGES3LE9PB15 166 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 SC5DO75845 299 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 RPLP1P05386 114 aaKnown RBP9.9□□□□□ -0.82
SNX1-209ENST00000559961 RCC1P18754 421 aaPredicted RBP9.9□□□□□ -0.82
SNX1-209ENST00000559961 MYF6P23409 242 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 ZNF137PP52743 207 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 HTD2P86397 168 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 PLGLAQ15195 96 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 MORN2Q502X0 79 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 RBM48Q5RL73 367 aaKnown RBP9.9□□□□□ -0.82
SNX1-209ENST00000559961 Q8N6K4 173 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 IL1F10Q8WWZ1 152 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 PHYHIPQ92561 330 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 URM1Q9BTM9 101 aaKnown RBP9.9□□□□□ -0.82
SNX1-209ENST00000559961 TMED9Q9BVK6 235 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 TMEM59Q9BXS4 323 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 RIMS4Q9H426 269 aaPredicted RBP9.9□□□□□ -0.82
SNX1-209ENST00000559961 PLEKHJ1Q9NW61 149 aa9.9□□□□□ -0.82
SNX1-209ENST00000559961 WI2-2373I1.2A0A1W2PRP0 233 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 LINC01548A6NM66 108 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 SLC31A2O15432 143 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 YPEL1O60688 119 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 BPNT1O95861 308 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 CD40LGP29965 261 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 F2RL1P55085 397 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 KRTAP10-11P60412 298 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 MRPS15P82914 257 aaKnown RBP9.89□□□□□ -0.83
SNX1-209ENST00000559961 LSAMPQ13449 338 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 MED22Q15528 200 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 HSD17B12Q53GQ0 312 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 ETV3LQ6ZN32 361 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 CEACAM19Q7Z692 300 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 GAPTQ8N292 157 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 ZNF485Q8NCK3 441 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 ZNF439Q8NDP4 499 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 TMEM104Q8NE00 496 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 OR52L2PQ8NGH6 319 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 RAX2Q96IS3 184 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 KCTD7Q96MP8 289 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 YPEL2Q96QA6 119 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 P2RX4Q99571 388 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 GHITMQ9H3K2 345 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 PIPOXQ9P0Z9 390 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 MGAT4AQ9UM21 535 aa9.89□□□□□ -0.83
SNX1-209ENST00000559961 ZNF736B4DX44 427 aaPredicted RBP9.88□□□□□ -0.83
SNX1-209ENST00000559961 SEC14L6B5MCN3 397 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms