RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SRPXP78539 464 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 EDDM3AQ14507 147 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 GGNBP1Q5YKI7 109 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 ZNF546Q86UE3 836 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 MUC15Q8N387 334 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 DEFB108BQ8NET1 73 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 ARL11Q969Q4 196 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 PARP12Q9H0J9 701 aaKnown RBP10.57□□□□□ -0.72
USP3-213ENST00000559711 DNTTIP1Q9H147 329 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 TMEM106BQ9NUM4 274 aa10.57□□□□□ -0.72
USP3-213ENST00000559711 CHD3Q12873 2000 aaKnown RBP10.56□□□□□ -0.72
USP3-213ENST00000559711 IGSF10Q6WRI0 2623 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 TRAV38-1A0A0B4J264 116 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 SIGLEC5O15389 551 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 ARPC5O15511 151 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 ZG16O60844 167 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 B3GALNT1O75752 331 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 GYPAP02724 150 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 CGB3P0DN86 165 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 CGB7P0DN87 165 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 OR52L2PQ8NGH6 319 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 C14orf79Q96F83 325 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 CCL13Q99616 98 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 DCTN5Q9BTE1 182 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 OR6C3Q9NZP0 311 aa10.56□□□□□ -0.72
USP3-213ENST00000559711 FBXO9Q9UK97 447 aaPredicted RBP10.56□□□□□ -0.72
USP3-213ENST00000559711 PPIAL4EA0A075B759 164 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 PPIAL4DF5H284 164 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 H0Y980 276 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 TNFRSF13BO14836 293 aaPredicted RBP10.55□□□□□ -0.72
USP3-213ENST00000559711 CDS2O95674 445 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 OR8U9P0C7N5 309 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 PPIAL4FP0DN26 164 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 SELLP14151 372 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 F2RP25116 425 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 UCP1P25874 307 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 SSTR5P35346 364 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 OPCMLQ14982 345 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 LRRC37A5PQ49AS3 106 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 LYZL2Q7Z4W2 148 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 OR8U1Q8NH10 309 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 LHFPL5Q8TAF8 219 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 THAP6Q8TBB0 222 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 CCL17Q92583 94 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 RNF126Q9BV68 326 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 MFFQ9GZY8 342 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 TNFSF18Q9UNG2 199 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 UBE2J1Q9Y385 318 aaPredicted RBP10.55□□□□□ -0.72
USP3-213ENST00000559711 TMED3Q9Y3Q3 217 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 PPIAL4AQ9Y536 164 aa10.55□□□□□ -0.72
USP3-213ENST00000559711 DIDO1Q9BTC0 2240 aaKnown RBP10.54□□□□□ -0.72
USP3-213ENST00000559711 A0A1B0GW55 424 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 F2RL2O00254 374 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 DUX4L2P0CJ85 424 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 DUX4L3P0CJ86 424 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 DUX4L4P0CJ87 422 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 DUX4L5P0CJ88 424 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 DUX4L6P0CJ89 424 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 DUX4L7P0CJ90 424 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 LYL1P12980 280 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 S100A11P31949 105 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 GNMTQ14749 295 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 MSMO1Q15800 293 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 IAH1Q2TAA2 248 aaPredicted RBP10.54□□□□□ -0.72
USP3-213ENST00000559711 DUX4L9Q6RFH8 374 aaPredicted RBP10.54□□□□□ -0.72
USP3-213ENST00000559711 TMUB2Q71RG4 321 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 ZBTB34Q8NCN2 500 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 RFESDQ8TAC1 157 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 FAM216AQ8WUB2 273 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 NINJ1Q92982 152 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 IL22RA2Q969J5 263 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 OR2S2Q9NQN1 319 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 DUX4Q9UBX2 424 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 RBM7Q9Y580 266 aaKnown RBP10.54□□□□□ -0.72
USP3-213ENST00000559711 USP24Q9UPU5 2620 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 HIVEP3Q5T1R4 2406 aa10.54□□□□□ -0.72
USP3-213ENST00000559711 IGHV1-69-2A0A0G2JMI3 117 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 DUXBA0A1W2PPF3 345 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 H0YIZ8 118 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 TSC22D2O75157 780 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 PPOXP50336 477 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 EDDM3BP56851 147 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 ZNF345Q14585 488 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 ZNF767PQ75MW2 155 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 SELENOHQ8IZQ5 122 aaKnown RBP10.53□□□□□ -0.72
USP3-213ENST00000559711 ZNF645Q8N7E2 425 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 FAM216BQ8N7L0 139 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 CORO2AQ92828 525 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 GPHA2Q96T91 129 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 GSKIPQ9P0R6 139 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 MBD2Q9UBB5 411 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 CACNA1DQ01668 2161 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 A0A0D9SG52 128 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 NKX6-3A6NJ46 265 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 TNFSF12O43508 249 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 OR2F2O95006 317 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 PPP1CCP36873 323 aaKnown RBP10.53□□□□□ -0.72
USP3-213ENST00000559711 OR2F1Q13607 317 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 RAB32Q13637 225 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 ESCO2Q56NI9 601 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms