RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SSX1Q16384 188 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 KHDC1LQ5JSQ8 128 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 OR2W3Q7Z3T1 314 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 CENPVQ7Z7K6 275 aaPredicted RBP6.54□□□□□ -1.36
SNX1-207ENST00000559401 TGIF2LXQ8IUE1 241 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 Q8N2B8 174 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 OR51D1Q8NGF3 324 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 OR52L2PQ8NGH6 319 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 MRPL30Q8TCC3 161 aaKnown RBP6.54□□□□□ -1.36
SNX1-207ENST00000559401 IL1F10Q8WWZ1 152 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 CFHR4Q92496 578 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 GFI1Q99684 422 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 OCSTAMPQ9BR26 566 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 TM2D1Q9BX74 207 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 LPAR5Q9H1C0 372 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 PLEKHJ1Q9NW61 149 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 NDUFB11Q9NX14 153 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 V9GY05 133 aa6.54□□□□□ -1.36
SNX1-207ENST00000559401 PKD1L1Q8TDX9 2849 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 SMIM30A4D0T7 59 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 NCBP2LA6PVI3 153 aaKnown RBP6.53□□□□□ -1.36
SNX1-207ENST00000559401 SOCS1O15524 211 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 TXNL1O43396 289 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 RGS11O94810 467 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 VEGFCP49767 419 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 PSMD7P51665 324 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 DEFA6Q01524 100 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 ZNF816Q0VGE8 651 aaPredicted RBP6.53□□□□□ -1.36
SNX1-207ENST00000559401 C22orf42Q6IC83 251 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 SLC25A48Q6ZT89 311 aaKnown RBP6.53□□□□□ -1.36
SNX1-207ENST00000559401 MOB1BQ7L9L4 216 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 C5orf24Q7Z6I8 188 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 ZNF554Q86TJ5 538 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 THNSL2Q86YJ6 484 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 GAPTQ8N292 157 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 LINC00311Q8N616 119 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 C8orf31Q8N9H6 132 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 OR2AK2Q8NG84 335 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 OR5AU1Q8NGC0 362 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 OR4X2Q8NGF9 303 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 RTN4IP1Q8WWV3 396 aaPredicted RBP6.53□□□□□ -1.36
SNX1-207ENST00000559401 FAM3DQ96BQ1 224 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 GALMQ96C23 342 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 R3HDM4Q96D70 268 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 CITED2Q99967 270 aaPredicted RBP6.53□□□□□ -1.36
SNX1-207ENST00000559401 ABHD14AQ9BUJ0 271 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 MBNL3Q9NUK0 354 aaKnown RBP6.53□□□□□ -1.36
SNX1-207ENST00000559401 STEAP1Q9UHE8 339 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 AK3Q9UIJ7 227 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 JPT1Q9UK76 154 aa6.53□□□□□ -1.36
SNX1-207ENST00000559401 RRP15Q9Y3B9 282 aaKnown RBP6.53□□□□□ -1.36
SNX1-207ENST00000559401 A0A0A6YYD4 124 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 FAM90A9PA6NNJ1 464 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 SERPINE3A8MV23 424 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 HSPA12AO43301 675 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 DENRO43583 198 aaKnown RBP6.52□□□□□ -1.37
SNX1-207ENST00000559401 MRPS14O60783 128 aaKnown RBP6.52□□□□□ -1.37
SNX1-207ENST00000559401 PF4V1P10720 104 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 RAB3BP20337 219 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 OR10A3P58181 314 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 MRPS15P82914 257 aaKnown RBP6.52□□□□□ -1.37
SNX1-207ENST00000559401 QRFPP83859 136 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 C2orf76Q3KRA6 126 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 Q3ZCU0 254 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 MORN2Q502X0 79 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 CT45A1Q5HYN5 189 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 NDUFA11Q86Y39 141 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 C1QL4Q86Z23 238 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 SPARTQ8N0X7 666 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 C5orf56Q8N8D9 126 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 ZNF439Q8NDP4 499 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 OR56B1Q8NGI3 324 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 OR2T10Q8NGZ9 312 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 CT45A3Q8NHU0 189 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 FCGR1BQ92637 280 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 ARHGAP5-AS1Q96IT6 56 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 EAF1Q96JC9 268 aaPredicted RBP6.52□□□□□ -1.37
SNX1-207ENST00000559401 HDHD3Q9BSH5 251 aaPredicted RBP6.52□□□□□ -1.37
SNX1-207ENST00000559401 WNT10AQ9GZT5 417 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 C12orf4Q9NQ89 552 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 LRRC42Q9Y546 428 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 WNK1Q9H4A3 2382 aa6.52□□□□□ -1.37
SNX1-207ENST00000559401 A0A075B6Q4 140 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 TMEM272A0A1B0GTI8 110 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 TRDV1A0A1B0GX56 115 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 TCRBV4S1A1TA0A5B7 111 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 PSMB11A5LHX3 300 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 ZNF736B4DX44 427 aaPredicted RBP6.51□□□□□ -1.37
SNX1-207ENST00000559401 ST8SIA5O15466 376 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 FGF16O43320 207 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 NAPSAO96009 420 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 MOSP00540 346 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 OPN1MWP04001 364 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 AMY1AP04745 511 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 AMY2AP04746 511 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 CD3GP09693 182 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 OPN1MW2P0DN77 364 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 OPN1MW3P0DN78 364 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 CD37P11049 281 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 GADD45AP24522 165 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms