RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ZNF665Q9H7R5 613 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 CTSZQ9UBR2 303 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 DUX4Q9UBX2 424 aa13.71□□□□□ -0.21
TPM1-219ENST00000559397 C14orf166Q9Y224 244 aaKnown RBP13.71□□□□□ -0.21
TPM1-219ENST00000559397 TRBV6-7A0A0A0MS04 114 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 CYSRT1A8MQ03 144 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 F5H0A9 414 aaPredicted RBP13.7□□□□□ -0.22
TPM1-219ENST00000559397 SIGLEC5O15389 551 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 TMPRSS2O15393 492 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 FCN3O75636 299 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 SFT2D2O95562 160 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 DIRAS3O95661 229 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 PPYP01298 95 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 GIPP09681 153 aaPredicted RBP13.7□□□□□ -0.22
TPM1-219ENST00000559397 ZNF728P0DKX0 622 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 NFYAP23511 347 aaPredicted RBP13.7□□□□□ -0.22
TPM1-219ENST00000559397 SEC61A1P61619 476 aaKnown RBP13.7□□□□□ -0.22
TPM1-219ENST00000559397 WFDC11Q8NEX6 87 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 CLDND2Q8NHS1 167 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 SNX22Q96L94 193 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 PATZ1Q9HBE1 687 aaKnown RBP13.7□□□□□ -0.22
TPM1-219ENST00000559397 TRAPPC2LQ9UL33 140 aa13.7□□□□□ -0.22
TPM1-219ENST00000559397 A0A0B4J2A0 478 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 SMLR1H3BR10 107 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 BET1O15155 118 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 ADAM20O43506 726 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 IGHV2-5P01817 119 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 WNT2P09544 360 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 SELLP14151 372 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 CD34P28906 385 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 LMO4P61968 165 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 ZNF561Q8N587 486 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 FAM216BQ8N7L0 139 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 RSRP1Q9BUV0 290 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 MIOXQ9UGB7 285 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 SHPKQ9UHJ6 478 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 KIF25Q9UIL4 384 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 TRAV39A0A0B4J263 110 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 NKX6-3A6NJ46 265 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 DBX1A6NMT0 343 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 SLC22A5O76082 557 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 VAMP1P23763 118 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 H2BFSP57053 126 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 RAP2BP61225 183 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 HERV-K104P61576 105 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 AESQ08117 197 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 ZNF841Q6ZN19 808 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 SLC38A6Q8IZM9 456 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 ASCC1Q8N9N2 400 aaKnown RBP13.69□□□□□ -0.22
TPM1-219ENST00000559397 UXS1Q8NBZ7 420 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 ZNRF1Q8ND25 227 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 PHB2Q99623 299 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 ITGB1BP2Q9UKP3 347 aa13.69□□□□□ -0.22
TPM1-219ENST00000559397 CRYM-AS1A6NIL9 109 aa13.68□□□□□ -0.22
TPM1-219ENST00000559397 G3V3Q6 166 aa13.68□□□□□ -0.22
TPM1-219ENST00000559397 K7N7A8 449 aa13.68□□□□□ -0.22
TPM1-219ENST00000559397 USF1P22415 310 aaPredicted RBP13.68□□□□□ -0.22
TPM1-219ENST00000559397 ERP29P30040 261 aaKnown RBP13.68□□□□□ -0.22
TPM1-219ENST00000559397 FXYD4P59646 89 aa13.68□□□□□ -0.22
TPM1-219ENST00000559397 LY6G6FQ5SQ64 297 aa13.68□□□□□ -0.22
TPM1-219ENST00000559397 H1FOOQ8IZA3 346 aaPredicted RBP13.68□□□□□ -0.22
TPM1-219ENST00000559397 PPP1R35Q8TAP8 253 aa13.68□□□□□ -0.22
TPM1-219ENST00000559397 ASB13Q8WXK3 278 aa13.68□□□□□ -0.22
TPM1-219ENST00000559397 TOMM40LQ969M1 308 aa13.68□□□□□ -0.22
TPM1-219ENST00000559397 NEIL1Q96FI4 390 aaPredicted RBP13.68□□□□□ -0.22
TPM1-219ENST00000559397 KIRREL1Q96J84 757 aa13.68□□□□□ -0.22
TPM1-219ENST00000559397 TAF9BQ9HBM6 251 aa13.68□□□□□ -0.22
TPM1-219ENST00000559397 RNF223E7ERA6 249 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 GOSR2O14653 212 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 MGST3O14880 152 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 IL2RGP31785 369 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 SRSF4Q08170 494 aaKnown RBP13.67□□□□□ -0.22
TPM1-219ENST00000559397 KRBOX4Q5JUW0 171 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 LPCAT3Q6P1A2 487 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 FGFRL1Q8N441 504 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 OR5M8Q8NGP6 311 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 CASTOR1Q8WTX7 329 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 ZNF486Q96H40 463 aaPredicted RBP13.67□□□□□ -0.22
TPM1-219ENST00000559397 REG4Q9BYZ8 158 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 FAM234AQ9H0X4 552 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 NCOR1P1Q9H4R4 102 aa13.67□□□□□ -0.22
TPM1-219ENST00000559397 RANBP3Q9H6Z4 567 aaPredicted RBP13.67□□□□□ -0.22
TPM1-219ENST00000559397 FAM172BPA6NC97 362 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 SIX6O95475 246 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 GLIPR1P48060 266 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 PIGPP57054 158 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 LOXL1Q08397 574 aaPredicted RBP13.66□□□□□ -0.22
TPM1-219ENST00000559397 CR1LQ2VPA4 569 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 DCAF12L2Q5VW00 463 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 OR8B3Q8NGG8 313 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 OR10J5Q8NHC4 309 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 WDR89Q96FK6 387 aaPredicted RBP13.66□□□□□ -0.22
TPM1-219ENST00000559397 HYLS1Q96M11 299 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 OR8B2Q96RD0 313 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 CHIAQ9BZP6 476 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 KCNIP1Q9NZI2 227 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 OPN4Q9UHM6 478 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 OTOGQ6ZRI0 2925 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 MYO9AB2RTY4 2548 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 IGKV1D-13A0A0B4J2D9 117 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms