RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 A0A1W2PPI3 338 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 MAGEA13PA6NCF6 341 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 NCBP2LA6PVI3 153 aaKnown RBP5.8□□□□□ -1.48
SPG11-213ENST00000558988 E9PQ18 207 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 M0QZK8 103 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 CCRL2O00421 344 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 EBAG9O00559 213 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 SDCBPO00560 298 aaPredicted RBP5.8□□□□□ -1.48
SPG11-213ENST00000558988 HSD17B6O14756 317 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 GEMIN2O14893 280 aaKnown RBP5.8□□□□□ -1.48
SPG11-213ENST00000558988 WBP4O75554 376 aaKnown RBP5.8□□□□□ -1.48
SPG11-213ENST00000558988 AMY1AP04745 511 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 BDKRB2P30411 391 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 RBM11P57052 281 aaKnown RBP5.8□□□□□ -1.48
SPG11-213ENST00000558988 SLC35A2P78381 396 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 RIPK1Q13546 671 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 IL13RA2Q14627 380 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 ELP2Q6IA86 826 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 RPL22L1Q6P5R6 122 aaKnown RBP5.8□□□□□ -1.48
SPG11-213ENST00000558988 PXT1Q8NFP0 134 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 WIPF2Q8TF74 440 aaPredicted RBP5.8□□□□□ -1.48
SPG11-213ENST00000558988 ARL11Q969Q4 196 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 MUL1Q969V5 352 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 DUX3Q96PT4 197 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 TMEM138Q9NPI0 162 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 CHCHD3Q9NX63 227 aaKnown RBP5.8□□□□□ -1.48
SPG11-213ENST00000558988 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.8□□□□□ -1.48
SPG11-213ENST00000558988 CKLFQ9UBR5 152 aa5.8□□□□□ -1.48
SPG11-213ENST00000558988 TGP01266 2768 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 TRAV8-7A0A075B6U6 113 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 A0A087X0M5 115 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 A0A1B0GX30 115 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 TMEM30CPA0ZSE6 113 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 OOSP1A8MZH6 123 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 LY6LH3BQJ8 138 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 AIPO00170 330 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 LALBAP00709 142 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 MAS1P04201 325 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 CGB3P0DN86 165 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 CGB7P0DN87 165 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 DCKP27707 260 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 VHLP40337 213 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 C18orf65Q6ZTR6 163 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 SLC35E3Q7Z769 313 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 STX19Q8N4C7 294 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 KLHL30-AS1Q8NEE0 82 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 OR10V1Q8NGI7 309 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 OR4K15Q8NH41 348 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 HAVCR2Q8TDQ0 301 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 GHSRQ92847 366 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 FAM46BQ96A09 425 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 SMIM19Q96E16 107 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 BANF2Q9H503 90 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 FGF20Q9NP95 211 aaPredicted RBP5.79□□□□□ -1.48
SPG11-213ENST00000558988 PCDHB16Q9NRJ7 776 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 BABAM2Q9NXR7 383 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 GNG12Q9UBI6 72 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 TRAPPC2LQ9UL33 140 aa5.79□□□□□ -1.48
SPG11-213ENST00000558988 MRPS28Q9Y2Q9 187 aaKnown RBP5.79□□□□□ -1.48
SPG11-213ENST00000558988 EXOSC1Q9Y3B2 195 aaKnown RBP5.79□□□□□ -1.48
SPG11-213ENST00000558988 IGHV1-3A0A0C4DH29 117 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 IRGMA1A4Y4 181 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 LINC01548A6NM66 108 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 MCRIP1C9JLW8 97 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 SLC31A2O15432 143 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 CRTAPO75718 401 aaPredicted RBP5.78□□□□□ -1.48
SPG11-213ENST00000558988 GAPDHP04406 335 aaKnown RBP5.78□□□□□ -1.48
SPG11-213ENST00000558988 IGKV2-30P06310 120 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 GTF2F2P13984 249 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 KCNJ3P48549 501 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 RAB7AP51149 207 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 RPL23AP62750 156 aaKnown RBP5.78□□□□□ -1.48
SPG11-213ENST00000558988 SLC35B1P78383 322 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 BLOC1S1P78537 153 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 ST3GAL4Q11206 333 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 MED21Q13503 144 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 CCDC58Q4VC31 144 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 AWAT2Q6E213 333 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 RAB12Q6IQ22 244 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 ZNF529Q6P280 563 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 GLIPR1L1Q6UWM5 242 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 AHSA2Q719I0 299 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 LYSMD2Q8IV50 215 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 OR8H3Q8N146 312 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 DHRSXQ8N5I4 330 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 C5orf56Q8N8D9 126 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 SETD9Q8NE22 299 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 OR51D1Q8NGF3 324 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 OR1L1Q8NH94 360 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 DPF1Q92782 380 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 TMEM80Q96HE8 168 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 CYYR1Q96J86 154 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 SELENOIQ9C0D9 397 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 MRPS18AQ9NVS2 196 aaKnown RBP5.78□□□□□ -1.48
SPG11-213ENST00000558988 PAK1IP1Q9NWT1 392 aaPredicted RBP5.78□□□□□ -1.48
SPG11-213ENST00000558988 ETAA1Q9NY74 926 aa5.78□□□□□ -1.48
SPG11-213ENST00000558988 DIMT1Q9UNQ2 313 aaKnown RBP5.78□□□□□ -1.48
SPG11-213ENST00000558988 WI2-2373I1.2A0A1W2PRP0 233 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 GAGE12BA1L429 117 aa5.77□□□□□ -1.49
SPG11-213ENST00000558988 GAGE12HA6NDE8 117 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms