RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 FAM213BQ8TBF2 198 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 GRHL3Q8TE85 626 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 ZNF721Q8TF20 911 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 PTPMT1Q8WUK0 201 aaPredicted RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 MBD3L1Q8WWY6 194 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 MRPL24Q96A35 216 aaKnown RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 MOB3AQ96BX8 217 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 TM4SF19Q96DZ7 209 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 GNPNAT1Q96EK6 184 aaPredicted RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 C18orf12Q96KH6 178 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 TSSK2Q96PF2 358 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 TSPAN32Q96QS1 320 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 SLC22A12Q96S37 553 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 LPAR4Q99677 370 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 RARRES2Q99969 163 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 FAM110AQ9BQ89 295 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 KXD1Q9BQD3 176 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 TM2D1Q9BX74 207 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 PARD6GQ9BYG4 376 aaPredicted RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 ULBP3Q9BZM4 244 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 OR2J1Q9GZK6 312 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 MAGT1Q9H0U3 335 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 SH3BGRL3Q9H299 93 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 METTL8Q9H825 291 aaKnown RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 UBE2ZQ9H832 354 aaPredicted RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 MOB1AQ9H8S9 216 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 ELOVL3Q9HB03 270 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 LYRM4Q9HD34 91 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 SLC2A9Q9NRM0 540 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 GLRX2Q9NS18 164 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 FKBP11Q9NYL4 201 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 ZNF581Q9P0T4 197 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 IL17BQ9UHF5 180 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 AK3Q9UIJ7 227 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 NAGKQ9UJ70 344 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 KCNS2Q9ULS6 477 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 PLAGL1Q9UM63 463 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 C14orf166Q9Y224 244 aaKnown RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 SLC22A13Q9Y226 551 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 FUT9Q9Y231 359 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 PTRH2Q9Y3E5 179 aaKnown RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 TMEM131Q92545 1883 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 NPIPA5A0A0B4J1W7 369 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 IGHV2-70DA0A0C4DH43 119 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 A0A0G2JN53 185 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 SERINC4A6NH21 518 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 LIPT2A6NK58 231 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 SERPINE3A8MV23 424 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 NPIPA7E9PJI5 369 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 ST8SIA3O43173 380 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 RAD51DO75771 328 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 KBTBD11O94819 623 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 VENTXO95231 258 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 DIRAS3O95661 229 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 IFNA21P01568 189 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 IGKV1D-16P01601 117 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 IGLV3-1P01715 115 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 PRH1P02810 166 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 WNT2P09544 360 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 NPIPA8P0DM63 369 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 HLA-DOBP13765 273 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 CD99P14209 185 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 GNB3P16520 340 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 TCN2P20062 427 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 GZMHP20718 246 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 TLX1P31314 330 aaPredicted RBP2.71□□□□□ -1.98
HERC1-203ENST00000558532 CDAP32320 146 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 SFTPDP35247 375 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 RPL29P47914 159 aaKnown RBP2.71□□□□□ -1.98
HERC1-203ENST00000558532 NPBWR2P48146 333 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 RAB7AP51149 207 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 CNN1P51911 297 aaKnown RBP2.71□□□□□ -1.98
HERC1-203ENST00000558532 RAB38P57729 211 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 SEC61BP60468 96 aaKnown RBP2.71□□□□□ -1.98
HERC1-203ENST00000558532 UBE2G2P60604 165 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 YPEL3P61236 119 aaPredicted RBP2.71□□□□□ -1.98
HERC1-203ENST00000558532 DCAF7P61962 342 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 RPS15AP62244 130 aaKnown RBP2.71□□□□□ -1.98
HERC1-203ENST00000558532 ARF6P62330 175 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 PAFAH1B2P68402 229 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 IGLV3-21P80748 117 aaPredicted RBP2.71□□□□□ -1.98
HERC1-203ENST00000558532 RHOGP84095 191 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 RPL18Q07020 188 aaKnown RBP2.71□□□□□ -1.98
HERC1-203ENST00000558532 ARL16Q0P5N6 197 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 UBE2V1Q13404 147 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 TRA2AQ13595 282 aaKnown RBP eCLIP2.71□□□□□ -1.98
HERC1-203ENST00000558532 FAM53BQ14153 422 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 P2RY6Q15077 328 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 MLF2Q15773 248 aaPredicted RBP2.71□□□□□ -1.98
HERC1-203ENST00000558532 TMEM183BQ1AE95 376 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 OR8G2PQ6IF36 304 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 INO80CQ6PI98 192 aaPredicted RBP2.71□□□□□ -1.98
HERC1-203ENST00000558532 PLXDC2Q6UX71 529 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 ASCL4Q6XD76 172 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 TMEM182Q6ZP80 229 aaPredicted RBP2.71□□□□□ -1.98
HERC1-203ENST00000558532 C9orf139Q6ZV77 190 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 SMIM15Q7Z3B0 74 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 KMT5CQ86Y97 462 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 ODF3L1Q8IXM7 274 aa2.71□□□□□ -1.98
HERC1-203ENST00000558532 PRSS58Q8IYP2 241 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms