RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 LINC00310P59036 64 aa9.59□□□□□ -0.87
PCAT29-201ENST00000558411 MMDQ15546 238 aa9.59□□□□□ -0.87
PCAT29-201ENST00000558411 TESK1Q15569 626 aa9.59□□□□□ -0.87
PCAT29-201ENST00000558411 RSPO1Q2MKA7 263 aaPredicted RBP9.59□□□□□ -0.87
PCAT29-201ENST00000558411 BRICD5Q6PL45 260 aa9.59□□□□□ -0.87
PCAT29-201ENST00000558411 FOXL2NBQ6ZUU3 175 aa9.59□□□□□ -0.87
PCAT29-201ENST00000558411 STPG4Q8N801 248 aa9.59□□□□□ -0.87
PCAT29-201ENST00000558411 OR5P3Q8WZ94 311 aa9.59□□□□□ -0.87
PCAT29-201ENST00000558411 LSM10Q969L4 123 aaKnown RBP9.59□□□□□ -0.87
PCAT29-201ENST00000558411 SPTSSAQ969W0 71 aa9.59□□□□□ -0.87
PCAT29-201ENST00000558411 ZNF799Q96GE5 643 aa9.59□□□□□ -0.87
PCAT29-201ENST00000558411 GMPPAQ96IJ6 420 aaPredicted RBP9.59□□□□□ -0.87
PCAT29-201ENST00000558411 ZNF552Q9H707 407 aaPredicted RBP9.59□□□□□ -0.87
PCAT29-201ENST00000558411 ZNF442Q9H7R0 627 aa9.59□□□□□ -0.87
PCAT29-201ENST00000558411 CDH23Q9H251 3354 aa9.59□□□□□ -0.87
PCAT29-201ENST00000558411 EXPH5Q8NEV8 1989 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 IGKV1-12A0A0C4DH73 117 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A10PA6NDY2 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A18PA6NE21 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A16PA6NEW6 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A20PA6NIJ5 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A8PA6NJQ4 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A7PA6NKC0 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A22PA8MWA6 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A12PA8MX19 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A5PA8MXJ8 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A23PA8MXZ1 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 TIAF1O95411 115 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 IGKV1D-33P01593 117 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 IGKV1-33P01594 117 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 IGKV1D-12P01611 117 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A15PP0C7V4 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A13PP0C7W8 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A14PP0C7W9 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 FAM90A24PP0C7X0 464 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 HNF1AP20823 631 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 F2RP25116 425 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 KIR2DL1P43626 348 aaPredicted RBP9.58□□□□□ -0.88
PCAT29-201ENST00000558411 LHX2P50458 406 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 RBM11P57052 281 aaKnown RBP9.58□□□□□ -0.88
PCAT29-201ENST00000558411 Q0VG73 95 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 SHBQ15464 509 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 CALHM1Q8IU99 346 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 C1orf174Q8IYL3 243 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 OR4C12Q96R67 309 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 CRISPLD2Q9H0B8 497 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 ZDHHC11Q9H8X9 412 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 PATZ1Q9HBE1 687 aaKnown RBP9.58□□□□□ -0.88
PCAT29-201ENST00000558411 LAMTOR2Q9Y2Q5 125 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 A0A0G2JRQ6 117 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 TNFSF12O43508 249 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 EFNA2O43921 213 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 PDE6DO43924 150 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 PGLYRP1O75594 196 aaPredicted RBP9.58□□□□□ -0.88
PCAT29-201ENST00000558411 SERF1AO75920 110 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 NXPH2O95156 264 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 CRISP2P16562 243 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 TNFRSF4P43489 277 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 C10orf128Q5T292 105 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 TMEM42Q69YG0 159 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 OR8G2PQ6IF36 304 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 SMIM15Q7Z3B0 74 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 LRP11Q86VZ4 500 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 ZNF738Q8NE65 137 aa9.58□□□□□ -0.88
PCAT29-201ENST00000558411 ALKBH7Q9BT30 221 aaPredicted RBP9.58□□□□□ -0.88
PCAT29-201ENST00000558411 ZNF703Q9H7S9 590 aaPredicted RBP9.58□□□□□ -0.88
PCAT29-201ENST00000558411 IGKV1D-13A0A0B4J2D9 117 aa9.57□□□□□ -0.88
PCAT29-201ENST00000558411 IGKV1-13P0DP09 117 aa9.57□□□□□ -0.88
PCAT29-201ENST00000558411 SUMO1P63165 101 aaKnown RBP9.57□□□□□ -0.88
PCAT29-201ENST00000558411 FAM180AQ6UWF9 173 aa9.57□□□□□ -0.88
PCAT29-201ENST00000558411 Q6ZSR6 202 aa9.57□□□□□ -0.88
PCAT29-201ENST00000558411 MRGPRX1Q96LB2 322 aa9.57□□□□□ -0.88
PCAT29-201ENST00000558411 ALKBH3Q96Q83 286 aaPredicted RBP9.57□□□□□ -0.88
PCAT29-201ENST00000558411 CHRNA10Q9GZZ6 450 aa9.57□□□□□ -0.88
PCAT29-201ENST00000558411 CCL28Q9NRJ3 127 aa9.57□□□□□ -0.88
PCAT29-201ENST00000558411 ZNF586Q9NXT0 402 aa9.57□□□□□ -0.88
PCAT29-201ENST00000558411 COX11Q9Y6N1 276 aa9.57□□□□□ -0.88
PCAT29-201ENST00000558411 KIR2DS1A0A191URI9 304 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 LRP5LA4QPB2 252 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 FAM166BA8MTA8 275 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 CBR3O75828 277 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 IGLC2P0DOY2 106 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 IGLC3P0DOY3 106 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 CD33P20138 364 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 NTSR1P30989 418 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 KIR2DS4P43632 304 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 HNRNPA3P51991 378 aaKnown RBP9.56□□□□□ -0.88
PCAT29-201ENST00000558411 FBXW4P57775 412 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 UBE2G2P60604 165 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 RPS20P60866 119 aaKnown RBP9.56□□□□□ -0.88
PCAT29-201ENST00000558411 KIR2DS1Q14954 304 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 PLPPR5Q32ZL2 321 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 SNAI3Q3KNW1 292 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 SPATA45Q537H7 98 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 TMEM196Q5HYL7 178 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 Q8N976 141 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 SGMS2Q8NHU3 365 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 SPPL3Q8TCT6 385 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 FAM122AQ96E09 287 aa9.56□□□□□ -0.88
PCAT29-201ENST00000558411 HSPB7Q9UBY9 170 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms