RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 WDR31Q8NA23 367 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 PPP1R35Q8TAP8 253 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 KLF14Q8TD94 323 aaPredicted RBP7.04□□□□□ -1.28
SPG11-209ENST00000558253 SFT2D1Q8WV19 159 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 ERGIC1Q969X5 290 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 GALMQ96C23 342 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 RBMXL1Q96E39 390 aaKnown RBP7.04□□□□□ -1.28
SPG11-209ENST00000558253 CYYR1Q96J86 154 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 LURAP1Q96LR2 239 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 TUBA4BQ9H853 241 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 SMCO4Q9NRQ5 59 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 PROCRQ9UNN8 238 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 EYSQ5T1H1 3165 aa7.04□□□□□ -1.28
SPG11-209ENST00000558253 TRAV1-1A0A0B4J248 108 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 MBD3L4A6NDZ8 208 aaPredicted RBP7.03□□□□□ -1.28
SPG11-209ENST00000558253 MBD3L3A6NE82 208 aaPredicted RBP7.03□□□□□ -1.28
SPG11-209ENST00000558253 MBD3L5A6NJ08 208 aaPredicted RBP7.03□□□□□ -1.28
SPG11-209ENST00000558253 CHST1O43916 411 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 WDR1O75083 606 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 NDUFS6O75380 124 aaKnown RBP7.03□□□□□ -1.28
SPG11-209ENST00000558253 RHBDL1O75783 438 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 HAND1O96004 215 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 CRYABP02511 175 aaKnown RBP7.03□□□□□ -1.28
SPG11-209ENST00000558253 SFTA3P0C7M3 94 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 OR8U9P0C7N5 309 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 MUC1P15941 1255 aaPredicted RBP7.03□□□□□ -1.28
SPG11-209ENST00000558253 RCC1P18754 421 aaPredicted RBP7.03□□□□□ -1.28
SPG11-209ENST00000558253 SULT1A1P50225 295 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 HBG1P69891 147 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 HBG2P69892 147 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 CATR1Q13166 79 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 RTP5Q14D33 572 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 TESK1Q15569 626 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 GUK1Q16774 197 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 Q3ZCU0 254 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 FAM209BQ5JX69 171 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 ATRAIDQ6UW56 229 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 TMPRSS7Q7RTY8 843 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 WFDC8Q8IUA0 241 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 CNEP1R1Q8N9A8 125 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 DEFB124Q8NES8 71 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 MBD3L2Q8NHZ7 208 aaPredicted RBP7.03□□□□□ -1.28
SPG11-209ENST00000558253 RNASE11Q8TAA1 199 aaKnown RBP7.03□□□□□ -1.28
SPG11-209ENST00000558253 CD300LFQ8TDQ1 290 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 ATP5SQ99766 215 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 SMIM3Q9BZL3 60 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 MS4A7Q9GZW8 240 aaPredicted RBP7.03□□□□□ -1.28
SPG11-209ENST00000558253 WFDC1Q9HC57 220 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 CRIM1Q9NZV1 1036 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 RNF115Q9Y4L5 304 aa7.03□□□□□ -1.28
SPG11-209ENST00000558253 RBM7Q9Y580 266 aaKnown RBP7.03□□□□□ -1.28
SPG11-209ENST00000558253 DOCK10Q96BY6 2186 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 IGSF23A1L1A6 192 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 OR5H1A6NKK0 313 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 PROB1E7EW31 1015 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 K7N7A8 449 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 CDIPTO14735 213 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 TIMM8AO60220 97 aaPredicted RBP7.02□□□□□ -1.29
SPG11-209ENST00000558253 SSSCA1O60232 199 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 SOX15O60248 233 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 LYZL6O75951 148 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 ADH4P08319 380 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 GZMHP20718 246 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 CD80P33681 288 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 CEACAM6P40199 344 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 CD81P60033 236 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 RAB4BP61018 213 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 SERF2P84101 59 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 HTD2P86397 168 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 NHLH2Q02577 135 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 PMS2P11Q13670 270 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 RHEBQ15382 184 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 ATP6V1FQ16864 119 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 KRTCAP3Q53RY4 240 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 CXorf66Q5JRM2 361 aaPredicted RBP7.02□□□□□ -1.29
SPG11-209ENST00000558253 DNLZQ5SXM8 178 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 ATP1A1-AS1Q5TC04 95 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 ZNF66Q6ZN08 573 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 ACP7Q6ZNF0 438 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 BHLHA15Q7RTS1 189 aaPredicted RBP7.02□□□□□ -1.29
SPG11-209ENST00000558253 ZNF645Q8N7E2 425 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 OR2G3Q8NGZ4 309 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 PLPPR1Q8TBJ4 325 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 SCGB1C1Q8TD33 95 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 NINJ1Q92982 152 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 GPR146Q96CH1 333 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 ZNF488Q96MN9 340 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 PSMG3Q9BT73 122 aaPredicted RBP7.02□□□□□ -1.29
SPG11-209ENST00000558253 SLC35B3Q9H1N7 401 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 ZNF71Q9NQZ8 489 aaPredicted RBP7.02□□□□□ -1.29
SPG11-209ENST00000558253 IL36RNQ9UBH0 155 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 ZDHHC8Q9ULC8 765 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 WASF3Q9UPY6 502 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 MED12Q93074 2177 aa7.02□□□□□ -1.29
SPG11-209ENST00000558253 SPAARA0A1B0GVQ0 90 aa7.01□□□□□ -1.29
SPG11-209ENST00000558253 FAM24AA6NFZ4 105 aa7.01□□□□□ -1.29
SPG11-209ENST00000558253 FAM90A9PA6NNJ1 464 aa7.01□□□□□ -1.29
SPG11-209ENST00000558253 FAM157AC9JC47 383 aa7.01□□□□□ -1.29
SPG11-209ENST00000558253 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
SPG11-209ENST00000558253 SIRPB1O00241 398 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms