RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 OMGP23515 440 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 RUNX1Q01196 453 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 ABHD12BQ7Z5M8 362 aaPredicted RBP9.35□□□□□ -0.91
USP3-206ENST00000558157 GCNT2Q8N0V5 402 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 ZNF441Q8N8Z8 693 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 OR5L1Q8NGL2 311 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 PINX1Q96BK5 328 aaKnown RBP9.35□□□□□ -0.91
USP3-206ENST00000558157 TMEM222Q9H0R3 208 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 SLC45A2Q9UMX9 530 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 FAM186AA6NE01 2351 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 CPAMD8Q8IZJ3 1885 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 OR6C6A6NF89 314 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 COX6A1P12074 109 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 RPL15P61313 204 aaKnown RBP9.35□□□□□ -0.91
USP3-206ENST00000558157 ID3Q02535 119 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 CMTM2Q8TAZ6 248 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 ZNF524Q96C55 264 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 CIB3Q96Q77 187 aaPredicted RBP9.35□□□□□ -0.91
USP3-206ENST00000558157 LIME1Q9H400 295 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 RPRMQ9NS64 109 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 PXMP4Q9Y6I8 212 aa9.35□□□□□ -0.91
USP3-206ENST00000558157 IGHV1-45A0A0A0MS14 117 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 NKX2-6A6NCS4 301 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 NPIPA5E9PKD4 350 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 CCL25O15444 150 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 ZNF17P17021 662 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 RPS20P60866 119 aaKnown RBP9.34□□□□□ -0.91
USP3-206ENST00000558157 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.91
USP3-206ENST00000558157 BATFQ16520 125 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 TMEM41BQ5BJD5 291 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 OR8G2PQ6IF36 304 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 COMMD2Q86X83 199 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 NECAP1Q8NC96 275 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 OR5D18Q8NGL1 313 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 THAP3Q8WTV1 239 aaPredicted RBP9.34□□□□□ -0.91
USP3-206ENST00000558157 CORO2AQ92828 525 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 ELOVL1Q9BW60 279 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 MAGT1Q9H0U3 335 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 NPIPA1Q9UND3 350 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 VDAC3Q9Y277 283 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 WIPI2Q9Y4P8 454 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 IGKV1-9A0A0C4DH69 117 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 C3orf85A0A1B0GTC6 90 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 A0A1W2PQD3 144 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 CBR3O75828 277 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 CELA2AP08217 269 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 OTX2P32243 289 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 WNT5AP41221 380 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 PLCXD2Q0VAA5 305 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 MORN2Q502X0 79 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 PHLDA2Q53GA4 152 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 SLC25A24Q6NUK1 477 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 C16orf47Q6ZP98 133 aaPredicted RBP9.34□□□□□ -0.91
USP3-206ENST00000558157 LINC01551Q86U37 167 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 ODF3L1Q8IXM7 274 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 C17orf78Q8N4C9 275 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 SCGB1C1Q8TD33 95 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 C11orf40Q8WZ69 217 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 WDYHV1Q96HA8 205 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 RASL10BQ96S79 203 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 DLL3Q9NYJ7 618 aa9.34□□□□□ -0.91
USP3-206ENST00000558157 PCSK5Q92824 1860 aa9.34□□□□□ -0.92
USP3-206ENST00000558157 CEP250Q9BV73 2442 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 TMED7-TICAM2A0A0A6YYA0 188 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 GFRA3O60609 400 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 CST7O76096 145 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 IGHEP01854 428 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 TSPO2Q5TGU0 170 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 C6orf201Q7Z4U5 140 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 PPP1R32Q7Z5V6 425 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 OR8B12Q8NGG6 310 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 Q96M66 194 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 ADOQ96SZ5 270 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
USP3-206ENST00000558157 PARD6GQ9BYG4 376 aaPredicted RBP9.33□□□□□ -0.92
USP3-206ENST00000558157 TRAPPC1Q9Y5R8 145 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 EXPH5Q8NEV8 1989 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 CNOT1A5YKK6 2376 aaKnown RBP9.33□□□□□ -0.92
USP3-206ENST00000558157 KNTC1P50748 2209 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 F6UZH7 168 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 MPPED1O15442 326 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 CIDEAO60543 219 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 ZNF737O75373 536 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 IL12BP29460 328 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 MDH2P40926 338 aaKnown RBP9.33□□□□□ -0.92
USP3-206ENST00000558157 FMODQ06828 376 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 OR8B8Q15620 311 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 EXT1Q16394 746 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 ZNF695Q8IW36 515 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 PP6455Q8WZ26 134 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 C10orf35Q96D05 121 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 DNAJA3Q96EY1 480 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 UQCR10Q9UDW1 63 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 PAM16Q9Y3D7 125 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 FREM3P0C091 2139 aa9.33□□□□□ -0.92
USP3-206ENST00000558157 LRRC3CA6NJW4 275 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 LILRA1O75019 489 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 OPN1LWP04000 364 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 OR5G3P0C626 314 aa9.32□□□□□ -0.92
USP3-206ENST00000558157 VDAC1P21796 283 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms