RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 BRI3O95415 125 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 ISG15P05161 165 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 S100A6P06703 90 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 HOXB6P17509 224 aaKnown RBP3.95□□□□□ -1.78
SPG11-208ENST00000558155 PRKACGP22612 351 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 ZNF137PP52743 207 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 TPPP2P59282 170 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 ACTBP60709 375 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 CTAG1AP78358 180 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 TRIM25Q14258 630 aaKnown RBP3.95□□□□□ -1.78
SPG11-208ENST00000558155 KISS1Q15726 138 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 C5orf64Q2M2E5 130 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 MOGAT2Q3SYC2 334 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 AKIRIN2Q53H80 203 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 ACTBL2Q562R1 376 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 AADACL4Q5VUY2 407 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 LCN12Q6JVE5 192 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 LINC00322Q6ZN03 302 aaPredicted RBP3.95□□□□□ -1.78
SPG11-208ENST00000558155 KCTD20Q7Z5Y7 419 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 TMEM179BQ7Z7N9 219 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 GID4Q8IVV7 300 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 SERPINA12Q8IW75 414 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 ARHGAP24Q8N264 748 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 Q8N402 240 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 TCEANCQ8N8B7 351 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 SUMF2Q8NBJ7 301 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 PXT1Q8NFP0 134 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 NPBQ8NG41 125 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 OR10H4Q8NGA5 316 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 OR5D14Q8NGL3 314 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 OR9G4Q8NGQ1 327 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 OR2G2Q8NGZ5 317 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 PLPPR1Q8TBJ4 325 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 ABHD5Q8WTS1 349 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 CCDC107Q8WV48 283 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 DNAJC9Q8WXX5 260 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 RGP1Q92546 391 aaPredicted RBP3.95□□□□□ -1.78
SPG11-208ENST00000558155 CPNE2Q96FN4 548 aaPredicted RBP3.95□□□□□ -1.78
SPG11-208ENST00000558155 MS4A10Q96PG2 267 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 TBX5Q99593 518 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 ELAC2Q9BQ52 826 aaKnown RBP3.95□□□□□ -1.78
SPG11-208ENST00000558155 UQCC2Q9BRT2 126 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 DPCDQ9BVM2 203 aaPredicted RBP3.95□□□□□ -1.78
SPG11-208ENST00000558155 SLA2Q9H6Q3 261 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 ARGLU1Q9NWB6 273 aaPredicted RBP3.95□□□□□ -1.78
SPG11-208ENST00000558155 SLC2A8Q9NY64 477 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 FAM53CQ9NYF3 392 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 GNG12Q9UBI6 72 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 WARS2Q9UGM6 360 aaKnown RBP3.95□□□□□ -1.78
SPG11-208ENST00000558155 TAGLN3Q9UI15 199 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 DHDHQ9UQ10 334 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 KLK5Q9Y337 293 aaPredicted RBP3.95□□□□□ -1.78
SPG11-208ENST00000558155 NUBP2Q9Y5Y2 271 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 CSMD3Q7Z407 3707 aa3.95□□□□□ -1.78
SPG11-208ENST00000558155 IGHV3-43A0A0B4J1X8 118 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 A0A0G2JLM5 398 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 C13orf42A0A1B0GVH6 325 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 SOX15O60248 233 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 TSC22D2O75157 780 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 HTR3BO95264 441 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 MT-ND4P03905 459 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 TRGV3P03979 118 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 IGHV3-43DP0DP04 118 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 CCR9P51686 369 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 ZNF134P52741 427 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 CRIP2P52943 208 aaPredicted RBP3.94□□□□□ -1.78
SPG11-208ENST00000558155 CX3CL1P78423 397 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 TAGLNQ01995 201 aaKnown RBP3.94□□□□□ -1.78
SPG11-208ENST00000558155 LSAMPQ13449 338 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 KLF5Q13887 457 aaPredicted RBP3.94□□□□□ -1.78
SPG11-208ENST00000558155 PTGES3Q15185 160 aaKnown RBP3.94□□□□□ -1.78
SPG11-208ENST00000558155 PLGLAQ15195 96 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 RSU1Q15404 277 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 TMEM30BQ3MIR4 351 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 CT45A1Q5HYN5 189 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 ZNF691Q5VV52 312 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 MZT2BQ6NZ67 158 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 CEMP1Q6PRD7 247 aaPredicted RBP3.94□□□□□ -1.78
SPG11-208ENST00000558155 CD200R1LQ6Q8B3 271 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 UNQ5815/PRO19632Q6UWF5 114 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 SSX6Q7RTT6 188 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 BCDIN3DQ7Z5W3 292 aaKnown RBP3.94□□□□□ -1.78
SPG11-208ENST00000558155 PPP1R27Q86WC6 154 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 LAX1Q8IWV1 398 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 C10orf67Q8IYJ2 551 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 SLC7A5P1Q8MH63 180 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 LILRB2Q8N423 598 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 STX19Q8N4C7 294 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 NKAIN3Q8N8D7 197 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 OR13C3Q8NGS6 347 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 OR13C9Q8NGT0 318 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 OR2K2Q8NGT1 345 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 CT45A3Q8NHU0 189 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 TMEM163Q8TC26 289 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 NEK7Q8TDX7 302 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 CASTOR1Q8WTX7 329 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 TMEM106AQ96A25 262 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 NRBF2Q96F24 287 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 RITA1Q96K30 269 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 GPER1Q99527 375 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms