RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 F6UZH7 168 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 LYPD3O95274 346 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FARS2O95363 451 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CNIH1O95406 144 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 IFNA7P01567 189 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 IGHG2P01859 326 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 HLA-DQB1P01920 261 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SMIM17P0DL12 118 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 IL2RGP31785 369 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TGFBR1P36897 503 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 MDH2P40926 338 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OR3A4PP47883 348 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SLC25A1P53007 311 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OR2B8PP59922 312 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 RPS15AP62244 130 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 C4orf26Q17RF5 130 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM52BQ4KMG9 183 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM128Q5BJH2 165 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 COA6Q5JTJ3 125 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FHL5Q5TD97 284 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FAM78BQ5VT40 261 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FAM131AQ6UXB0 335 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SLC25A45Q8N413 288 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 BPIFB6Q8NFQ5 453 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OR4K5Q8NGD3 323 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OR52E4Q8NGH9 312 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OR2A12Q8NGT7 310 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OR6N1Q8NGY5 312 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OR1F12Q8NHA8 337 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FAM45AQ8TCE6 357 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 NEIL2Q969S2 332 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FGGYQ96C11 551 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 RCN3Q96D15 328 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SIGMAR1Q99720 223 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 GINS3Q9BRX5 216 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 MARVELD1Q9BSK0 173 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 NDFIP1Q9BT67 221 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SUCNR1Q9BXA5 334 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 C1QTNF6Q9BXI9 259 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SRXN1Q9BYN0 137 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 NAA50Q9GZZ1 169 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 HMG20AQ9NP66 347 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SLC23A2Q9UGH3 650 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 PRO0628Q9UI54 55 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 BAIAP2Q9UQB8 552 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 OARD1Q9Y530 152 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 MYO5AQ9Y4I1 1855 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 BAZ2AQ9UIF9 1905 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 THSD7BQ9C0I4 1608 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 PLCH1Q4KWH8 1693 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 PKD1L3Q7Z443 1732 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 ANKRD31Q8N7Z5 1873 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 IGHV1OR15-1A0A075B7D0 117 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 NSG1A0A0A6YYJ2 146 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 A0A0G2JN53 185 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 C20orf202A1L168 122 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 IFITM5A6NNB3 132 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 E9PLD3 99 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 F5H5T6 163 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 NME4O00746 187 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 MPZL2O60487 215 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 EIF4E2O60573 245 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 UTS2O95399 124 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 HBZP02008 142 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 OPN1SWP03999 348 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 PFN1P07737 140 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 RAB3BP20337 219 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 HIST1H1TP22492 207 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 IL12AP29459 219 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 PTGDSP41222 190 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 NSG1P42857 185 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 RPS9P46781 194 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 EFNB2P52799 333 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 OR12D2P58182 307 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 RHOBP62745 196 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 FABP5Q01469 135 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 PRKCDQ05655 676 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 ST3GAL3Q11203 375 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 EDDM3AQ14507 147 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 PDGFRLQ15198 375 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 RSU1Q15404 277 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 HIST3H3Q16695 136 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 LRRC75BQ2VPJ9 315 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 LGALSLQ3ZCW2 172 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 KLF17Q5JT82 389 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 CST9Q5W186 159 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 CBLN2Q8IUK8 224 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TRAPPC5Q8IUR0 188 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 C8orf59Q8N0T1 100 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 PNKDQ8N490 385 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 ATPAF2Q8N5M1 289 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 OR4C13Q8NGP0 309 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 OR6N2Q8NGY6 317 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 OR8D1Q8WZ84 308 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 C10orf35Q96D05 121 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 KCTD7Q96MP8 289 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 MS4A4EQ96PG1 132 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 FMO2Q99518 471 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 SELENOIQ9C0D9 397 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 RHOJQ9H4E5 214 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms