RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 SCTP09683 121 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 HTR1DP28221 377 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 SOX6P35712 828 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 PRRX1P54821 245 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 GNG2P59768 71 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 UBA52P62987 128 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 SLC9A3R2Q15599 337 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 PNLIPRP3Q17RR3 467 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 MZT2AQ6P582 158 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 ZNF439Q8NDP4 499 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 IL1F10Q8WWZ1 152 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 GALMQ96C23 342 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 S100A16Q96FQ6 103 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 MMP28Q9H239 520 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 OR2S2Q9NQN1 319 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 RSL24D1Q9UHA3 163 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 ZNF230Q9UIE0 474 aaPredicted RBP12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 JPT1Q9UK76 154 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 MGAT4AQ9UM21 535 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 CUBNO60494 3623 aa12.02□□□□□ -0.49
VIPAS39-210ENST00000557466 TRDCB7Z8K6 153 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 BUB1B-PAK6H3BSN5 160 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 SLC31A2O15432 143 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 XRCC3O43542 346 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 APOA1P02647 267 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 PTHLHP12272 177 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 ELK1P19419 428 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 PPP1CCP36873 323 aaKnown RBP12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 TALDO1P37837 337 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 HTD2P86397 168 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 SSX2Q16385 188 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 Q3ZCU0 254 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 PLA1AQ53H76 456 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 MALSU1Q96EH3 234 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 CMTM3Q96MX0 182 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 MEGF9Q9H1U4 602 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 AUNIPQ9H7T9 357 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 TNFRSF19Q9NS68 423 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 DPM3Q9P2X0 92 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 HILPDAQ9Y5L2 63 aa12.01□□□□□ -0.49
VIPAS39-210ENST00000557466 IGKV1D-8A0A087WSZ0 117 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 IGKV1-6A0A0C4DH72 117 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 LY6LH3BQJ8 138 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 DTYMKP23919 212 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 IER3P46695 156 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 TAS2R20P59543 309 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 PITPNAQ00169 270 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 HERPUD1Q15011 391 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 LRRC75BQ2VPJ9 315 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 MORN2Q502X0 79 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 TMEM69Q5SWH9 247 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 TPTE2P1Q5T6R2 138 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 LINC00311Q8N616 119 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 C8orf31Q8N9H6 132 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 SSMEM1Q8WWF3 244 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 OR1A1Q9P1Q5 309 aa12□□□□□ -0.49
VIPAS39-210ENST00000557466 AMMECR1Q9Y4X0 333 aaPredicted RBP12□□□□□ -0.49
VIPAS39-210ENST00000557466 LEUTXA8MZ59 168 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 CLDN34H7C241 214 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 TRIM77I1YAP6 450 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 FABP7O15540 132 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 YPEL1O60688 119 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 MNDAP41218 407 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 KIR2DS4P43632 304 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 ZNF134P52741 427 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 MADCAM1Q13477 382 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 KIR2DS1Q14954 304 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 SRSF7Q16629 238 aaKnown RBP eCLIP11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 KRTAP24-1Q3LI83 254 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 CT45A1Q5HYN5 189 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 STEAP3Q658P3 488 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 Q6ZS49 121 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 SLC25A48Q6ZT89 311 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 TMEM86BQ8N661 226 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 OR4A4PQ8NGN8 299 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 OR10X1Q8NGY0 326 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 CT45A3Q8NHU0 189 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 GCDHQ92947 438 aaPredicted RBP11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 CREB3L1Q96BA8 519 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 YPEL2Q96QA6 119 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 SSX3Q99909 188 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 CABLES2Q9BTV7 478 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 CHIAQ9BZP6 476 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 SLIRPQ9GZT3 109 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 PARP12Q9H0J9 701 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 MIXL1Q9H2W2 232 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 SLC23A1Q9UHI7 598 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 POMT1Q9Y6A1 747 aa11.99□□□□□ -0.49
VIPAS39-210ENST00000557466 FAM25AB3EWG3 89 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 FAM25CB3EWG5 89 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 FAM25GB3EWG6 89 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 H3BUX3 64 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 ZNF701M0R085 212 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 CTDSP2O14595 271 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 RNASE1P07998 156 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 GSTT2P0CG29 244 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 GSTT2BP0CG30 244 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 CEACAM3P40198 252 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 DIAPH2-AS1Q14236 149 aa11.98□□□□□ -0.49
VIPAS39-210ENST00000557466 AANATQ16613 207 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms