RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 TCRBV4S1A1TA0A5B7 111 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 NCBP2LA6PVI3 153 aaKnown RBP13.15□□□□□ -0.3
VSX1-207ENST00000557285 ADARB2-AS1A8MUL3 147 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 G3V4G9 280 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 SLC22A1O15245 554 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 CA11O75493 328 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 CHATP28329 748 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 BLVRBP30043 206 aaPredicted RBP13.15□□□□□ -0.3
VSX1-207ENST00000557285 PPP1CCP36873 323 aaKnown RBP13.15□□□□□ -0.3
VSX1-207ENST00000557285 ZNF134P52741 427 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 CLDN12P56749 244 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 EMX1Q04741 257 aaPredicted RBP13.15□□□□□ -0.3
VSX1-207ENST00000557285 ZNF816Q0VGE8 651 aaPredicted RBP13.15□□□□□ -0.3
VSX1-207ENST00000557285 TRAM1Q15629 374 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 RAB11BQ15907 218 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 PDLIM3Q53GG5 364 aaPredicted RBP13.15□□□□□ -0.3
VSX1-207ENST00000557285 CT45A1Q5HYN5 189 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 LINC00311Q8N616 119 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 C5orf56Q8N8D9 126 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 CT45A3Q8NHU0 189 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 KCNG3Q8TAE7 436 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 RTN4IP1Q8WWV3 396 aaPredicted RBP13.15□□□□□ -0.3
VSX1-207ENST00000557285 GFI1Q99684 422 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 ISYNA1Q9NPH2 558 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 LINC00527Q9UJ94 153 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 BLOC1S6Q9UL45 172 aa13.15□□□□□ -0.3
VSX1-207ENST00000557285 ZNF736B4DX44 427 aaPredicted RBP13.14□□□□□ -0.31
VSX1-207ENST00000557285 ARL6IP5O75915 188 aa13.14□□□□□ -0.31
VSX1-207ENST00000557285 BPNT1O95861 308 aa13.14□□□□□ -0.31
VSX1-207ENST00000557285 GLAP06280 429 aa13.14□□□□□ -0.31
VSX1-207ENST00000557285 SLC25A48Q6ZT89 311 aaKnown RBP13.14□□□□□ -0.31
VSX1-207ENST00000557285 ZNF367Q7RTV3 350 aa13.14□□□□□ -0.31
VSX1-207ENST00000557285 ZNF329Q86UD4 541 aa13.14□□□□□ -0.31
VSX1-207ENST00000557285 TGIF2LXQ8IUE1 241 aa13.14□□□□□ -0.31
VSX1-207ENST00000557285 GAPTQ8N292 157 aa13.14□□□□□ -0.31
VSX1-207ENST00000557285 OR4F17Q8NGA8 305 aa13.14□□□□□ -0.31
VSX1-207ENST00000557285 OR4X2Q8NGF9 303 aa13.14□□□□□ -0.31
VSX1-207ENST00000557285 IL1F10Q8WWZ1 152 aa13.14□□□□□ -0.31
VSX1-207ENST00000557285 EAF1Q96JC9 268 aaPredicted RBP13.14□□□□□ -0.31
VSX1-207ENST00000557285 NOL4LQ96MY1 436 aaPredicted RBP13.14□□□□□ -0.31
VSX1-207ENST00000557285 OR4F4Q96R69 305 aa13.14□□□□□ -0.31
VSX1-207ENST00000557285 A0A0A6YYD4 124 aa13.13□□□□□ -0.31
VSX1-207ENST00000557285 TMEM14DPA8MWL7 114 aa13.13□□□□□ -0.31
VSX1-207ENST00000557285 SOCS1O15524 211 aa13.13□□□□□ -0.31
VSX1-207ENST00000557285 PF4V1P10720 104 aa13.13□□□□□ -0.31
VSX1-207ENST00000557285 ARSBP15848 533 aa13.13□□□□□ -0.31
VSX1-207ENST00000557285 PSMA1P25786 263 aaKnown RBP13.13□□□□□ -0.31
VSX1-207ENST00000557285 QRFPP83859 136 aa13.13□□□□□ -0.31
VSX1-207ENST00000557285 TBCEQ15813 527 aaPredicted RBP13.13□□□□□ -0.31
VSX1-207ENST00000557285 TCTEX1D4Q5JR98 221 aa13.13□□□□□ -0.31
VSX1-207ENST00000557285 C8orf31Q8N9H6 132 aa13.13□□□□□ -0.31
VSX1-207ENST00000557285 ZNF439Q8NDP4 499 aa13.13□□□□□ -0.31
VSX1-207ENST00000557285 MBNL3Q9NUK0 354 aaKnown RBP13.13□□□□□ -0.31
VSX1-207ENST00000557285 PLEKHJ1Q9NW61 149 aa13.13□□□□□ -0.31
VSX1-207ENST00000557285 RAB26Q9ULW5 256 aa13.13□□□□□ -0.31
VSX1-207ENST00000557285 PSMB11A5LHX3 300 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 SERPINE3A8MV23 424 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 SLC17A2O00624 439 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 CD83Q01151 205 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 SSX1Q16384 188 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 TMEM30BQ3MIR4 351 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 MORN2Q502X0 79 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 HES5Q5TA89 166 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 OR51D1Q8NGF3 324 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 ST6GALNAC6Q969X2 333 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 HDHD3Q9BSH5 251 aaPredicted RBP13.12□□□□□ -0.31
VSX1-207ENST00000557285 URM1Q9BTM9 101 aaKnown RBP13.12□□□□□ -0.31
VSX1-207ENST00000557285 ABHD14AQ9BUJ0 271 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 TM2D1Q9BX74 207 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 LPAR5Q9H1C0 372 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 ACOT13Q9NPJ3 140 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 ABRACLQ9P1F3 81 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 AK3Q9UIJ7 227 aa13.12□□□□□ -0.31
VSX1-207ENST00000557285 MOSP00540 346 aa13.11□□□□□ -0.31
VSX1-207ENST00000557285 PRB2P02812 416 aaPredicted RBP13.11□□□□□ -0.31
VSX1-207ENST00000557285 SLC35E3Q7Z769 313 aa13.11□□□□□ -0.31
VSX1-207ENST00000557285 IZUMO1Q8IYV9 350 aa13.11□□□□□ -0.31
VSX1-207ENST00000557285 GALMQ96C23 342 aa13.11□□□□□ -0.31
VSX1-207ENST00000557285 JPT1Q9UK76 154 aa13.11□□□□□ -0.31
VSX1-207ENST00000557285 TSSC4Q9Y5U2 329 aaPredicted RBP13.11□□□□□ -0.31
VSX1-207ENST00000557285 LINC01548A6NM66 108 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 FGF16O43320 207 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 PF4P02776 101 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 VEGFCP49767 419 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 OR10A3P58181 314 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 PLA2G7Q13093 441 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 HMGN3Q15651 99 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 Q3ZCU0 254 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 OXLD1Q5BKU9 147 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 Q6ZPA2 131 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 OR2W3Q7Z3T1 314 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 V9GY05 133 aa13.1□□□□□ -0.31
VSX1-207ENST00000557285 SMIM30A4D0T7 59 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 TXNL1O43396 289 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 RGS11O94810 467 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 CD37P11049 281 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 CD1BP29016 333 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 OR3A3P47888 321 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 ZNF137PP52743 207 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms