RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PRR25Q96S07 402 aa6.75□□□□□ -1.33
VRK1-206ENST00000557222 GPER1Q99527 375 aa6.75□□□□□ -1.33
VRK1-206ENST00000557222 ALG8Q9BVK2 526 aa6.75□□□□□ -1.33
VRK1-206ENST00000557222 METTL9Q9H1A3 318 aa6.75□□□□□ -1.33
VRK1-206ENST00000557222 OAZ3Q9UMX2 235 aa6.75□□□□□ -1.33
VRK1-206ENST00000557222 ST3GAL6Q9Y274 331 aa6.75□□□□□ -1.33
VRK1-206ENST00000557222 ORC6Q9Y5N6 252 aa6.75□□□□□ -1.33
VRK1-206ENST00000557222 CSMD3Q7Z407 3707 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 C9orf118A6NHY6 69 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 I3L521 148 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 SDCBPO00560 298 aaPredicted RBP6.74□□□□□ -1.33
VRK1-206ENST00000557222 GABRPO00591 440 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 OR7C1O76099 320 aaPredicted RBP6.74□□□□□ -1.33
VRK1-206ENST00000557222 FADS2O95864 444 aaKnown RBP6.74□□□□□ -1.33
VRK1-206ENST00000557222 MT-ND4P03905 459 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 ALPLP05186 524 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 CD2P06729 351 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 PPIFP30405 207 aaKnown RBP6.74□□□□□ -1.33
VRK1-206ENST00000557222 VHLP40337 213 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 REG1BP48304 166 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 RBM11P57052 281 aaKnown RBP6.74□□□□□ -1.33
VRK1-206ENST00000557222 RAB40BQ12829 278 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 ZSCAN26Q16670 478 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 LTC4SQ16873 150 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 DEFB136Q30KP8 78 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 PIGYQ3MUY2 71 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 ZNF260Q3ZCT1 412 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 CCDC58Q4VC31 144 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 FAM27D1Q5T7N8 215 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 TMEM65Q6PI78 240 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 TRAT1Q6PIZ9 186 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 ZNF497Q6ZNH5 498 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 SLC25A48Q6ZT89 311 aaKnown RBP6.74□□□□□ -1.33
VRK1-206ENST00000557222 SATL1Q86VE3 508 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 STX19Q8N4C7 294 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 ZNF491Q8N8L2 437 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 OR11H1Q8NG94 326 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 OR1N2Q8NGR9 330 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 OR52N1Q8NH53 320 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 TSEN15Q8WW01 171 aaKnown RBP6.74□□□□□ -1.33
VRK1-206ENST00000557222 KCTD7Q96MP8 289 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 Q96MT0 163 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 SPACA1Q9HBV2 294 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 TMEM138Q9NPI0 162 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 MRPS18AQ9NVS2 196 aaKnown RBP6.74□□□□□ -1.33
VRK1-206ENST00000557222 VSIG4Q9Y279 399 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 BIRC6Q9NR09 4857 aa6.74□□□□□ -1.33
VRK1-206ENST00000557222 IGHV3-72A0A0B4J1Y9 119 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 A0A1W2PPE3 182 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 FAM90A10PA6NDY2 464 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 SPINT2O43291 252 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 LANCL1O43813 399 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 CA11O75493 328 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 ATP5HO75947 161 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 CSTBP04080 98 aaKnown RBP6.73□□□□□ -1.33
VRK1-206ENST00000557222 GLAP06280 429 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 ZNF616Q08AN1 781 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 KIAA0141Q14154 515 aaPredicted RBP6.73□□□□□ -1.33
VRK1-206ENST00000557222 GPR176Q14439 515 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 C6orf183Q5T699 404 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 C1orf146Q5VVC0 180 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 ZNF554Q86TJ5 538 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 LHFPL3Q86UP9 236 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 GAPTQ8N292 157 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 ZNF439Q8NDP4 499 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 OR51A2Q8NGJ7 313 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 GPR148Q8TDV2 347 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 MRPS24Q96EL2 167 aaKnown RBP6.73□□□□□ -1.33
VRK1-206ENST00000557222 S100A13Q99584 98 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 ASCL2Q99929 193 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 PDCD1LG2Q9BQ51 273 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 HSPB9Q9BQS6 159 aa6.73□□□□□ -1.33
VRK1-206ENST00000557222 ISG20L2Q9H9L3 353 aaKnown RBP6.73□□□□□ -1.33
VRK1-206ENST00000557222 ZNF107Q9UII5 783 aaPredicted RBP6.73□□□□□ -1.33
VRK1-206ENST00000557222 STARD9Q9P2P6 4700 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 TRAV39A0A0B4J263 110 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 FAM90A7PA6NKC0 464 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 FAM90A23PA8MXZ1 464 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 AIPO00170 330 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 GEMIN2O14893 280 aaKnown RBP6.72□□□□□ -1.33
VRK1-206ENST00000557222 ARPC1BO15143 372 aaKnown RBP6.72□□□□□ -1.33
VRK1-206ENST00000557222 GPX5O75715 221 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 HLA-DRB1P01911 266 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 LYL1P12980 280 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 GTF2F2P13984 249 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 GABRB1P18505 474 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 BDKRB2P30411 391 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 ZNF93P35789 620 aaPredicted RBP6.72□□□□□ -1.33
VRK1-206ENST00000557222 ALDH3A2P51648 485 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 F2RL1P55085 397 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 PPP3R1P63098 170 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 CT45A1Q5HYN5 189 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 LY6G6FQ5SQ64 297 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 RPL22L1Q6P5R6 122 aaKnown RBP6.72□□□□□ -1.33
VRK1-206ENST00000557222 SBSPONQ8IVN8 264 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 MINDY2Q8NBR6 621 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 OR10K1Q8NGX5 313 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 CT45A3Q8NHU0 189 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 RHOXF1Q8NHV9 184 aa6.72□□□□□ -1.33
VRK1-206ENST00000557222 RCHY1Q96PM5 261 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms