RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 FAM27E3Q08E93 113 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 CLINT1Q14677 625 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 FIP1L1Q6UN15 594 aaKnown RBP8.49□□□□□ -1.05
TMEM260-211ENST00000556648 Q6ZRG5 221 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 Q6ZRM9 215 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 ZNF295-AS1Q8N0V1 137 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 DRAM1Q8N682 238 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 UBAC2Q8NBM4 344 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 HSD17B11Q8NBQ5 300 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 CLEC18CQ8NCF0 446 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 LRRC46Q96FV0 321 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 ABHD17AQ96GS6 310 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 RBM7Q9Y580 266 aaKnown RBP8.49□□□□□ -1.05
TMEM260-211ENST00000556648 KIAA2026Q5HYC2 2103 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 RIF1Q5UIP0 2472 aaKnown RBP8.49□□□□□ -1.05
TMEM260-211ENST00000556648 HEATR1Q9H583 2144 aaKnown RBP8.49□□□□□ -1.05
TMEM260-211ENST00000556648 DUXBA0A1W2PPF3 345 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 HBZP02008 142 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 CCKARP32238 428 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 FHITP49789 147 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 EIF5AP63241 154 aaKnown RBP8.49□□□□□ -1.05
TMEM260-211ENST00000556648 DEFA5Q01523 94 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 ZNF585BQ52M93 769 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 PRR30Q53SZ7 412 aaPredicted RBP8.49□□□□□ -1.05
TMEM260-211ENST00000556648 TIMM23BQ5SRD1 257 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 GPR157Q5UAW9 335 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 SLC35E4Q6ICL7 350 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 UQCC3Q6UW78 93 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 FAM180AQ6UWF9 173 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 BTNL8Q6UX41 500 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 ZNF808Q8N4W9 903 aaPredicted RBP8.49□□□□□ -1.05
TMEM260-211ENST00000556648 OR2C3Q8N628 320 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 FAM169BQ8N8A8 192 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 Q8NA96 180 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 OR13A1Q8NGR1 328 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 IL22RA2Q969J5 263 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 SPIN2AQ99865 258 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 SPIN2BQ9BPZ2 258 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 GINS3Q9BRX5 216 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 MGAQ8IWI9 3026 aa8.49□□□□□ -1.05
TMEM260-211ENST00000556648 LAMA5O15230 3695 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 CEP250Q9BV73 2442 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 BORCS7-ASMTA0A0B4J1R7 106 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 IGHV3-43A0A0B4J1X8 118 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 TMEM218A2RU14 115 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 B8ZZF3 427 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 PITX3O75364 302 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 SERPINE2P07093 398 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 IGHV3-43DP0DP04 118 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 MUC1P15941 1255 aaPredicted RBP8.48□□□□□ -1.05
TMEM260-211ENST00000556648 BMP5P22003 454 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 CEACAM8P31997 349 aaPredicted RBP8.48□□□□□ -1.05
TMEM260-211ENST00000556648 TIMP3P35625 211 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 PPP1CCP36873 323 aaKnown RBP8.48□□□□□ -1.05
TMEM260-211ENST00000556648 GABRA2P47869 451 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 PAX9P55771 341 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 ID3Q02535 119 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 PJVKQ0ZLH3 352 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 EDDM3AQ14507 147 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 TMEM171Q8WVE6 324 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 SAT2Q96F10 170 aaPredicted RBP8.48□□□□□ -1.05
TMEM260-211ENST00000556648 ZFP57Q9NU63 452 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 SH3BGRL2Q9UJC5 107 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 SPEF1Q9Y4P9 236 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 GVINP1Q7Z2Y8 2422 aa8.48□□□□□ -1.05
TMEM260-211ENST00000556648 IGKV1D-17A0A075B6S4 117 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 KIAA1324LA8MWY0 1029 aaPredicted RBP8.47□□□□□ -1.05
TMEM260-211ENST00000556648 C9JQL5 133 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 H3BP45 60 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 MKRN2OSH3BPM6 223 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 SPRY3O43610 288 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 CHST1O43916 411 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 CST7O76096 145 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 F12P00748 615 aaPredicted RBP8.47□□□□□ -1.05
TMEM260-211ENST00000556648 SPP1P10451 314 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 M6PRP20645 277 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 TUBG1P23258 451 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 TDGF1P3P51864 188 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 VAMP2P63027 116 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 NKX6-1P78426 367 aaPredicted RBP8.47□□□□□ -1.05
TMEM260-211ENST00000556648 GUCA2BQ16661 112 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 SMIM21Q3B7S5 101 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 OR2B11Q5JQS5 317 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 KRBOX4Q5JUW0 171 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 EIF5AL1Q6IS14 154 aaKnown RBP8.47□□□□□ -1.05
TMEM260-211ENST00000556648 MOGAT3Q86VF5 341 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 CISD2Q8N5K1 135 aaKnown RBP8.47□□□□□ -1.05
TMEM260-211ENST00000556648 TMEM252Q8N6L7 170 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 SFXN3Q9BWM7 321 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 OR2D2Q9H210 308 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 TREM1Q9NP99 234 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 TUBG2Q9NRH3 451 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 LYRM2Q9NU23 88 aaPredicted RBP8.47□□□□□ -1.05
TMEM260-211ENST00000556648 KCNIP1Q9NZI2 227 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 CACNG5Q9UF02 275 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 GLS2Q9UI32 602 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 RNF115Q9Y4L5 304 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 A0A0G2JNJ9 132 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 OOEPA6NGQ2 149 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms