RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 THNSL2Q86YJ6 484 aa6.45□□□□□ -1.38
VTI1B-206ENST00000556461 SPARTQ8N0X7 666 aa6.45□□□□□ -1.38
VTI1B-206ENST00000556461 OR51D1Q8NGF3 324 aa6.45□□□□□ -1.38
VTI1B-206ENST00000556461 CITED2Q99967 270 aaPredicted RBP6.45□□□□□ -1.38
VTI1B-206ENST00000556461 HDHD3Q9BSH5 251 aaPredicted RBP6.45□□□□□ -1.38
VTI1B-206ENST00000556461 MMP27Q9H306 513 aa6.45□□□□□ -1.38
VTI1B-206ENST00000556461 PLGRKTQ9HBL7 147 aa6.45□□□□□ -1.38
VTI1B-206ENST00000556461 GNG12Q9UBI6 72 aa6.45□□□□□ -1.38
VTI1B-206ENST00000556461 BLOC1S6Q9UL45 172 aa6.45□□□□□ -1.38
VTI1B-206ENST00000556461 TET2Q6N021 2002 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-206ENST00000556461 A0A0B4J203 849 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 IGHV1-3A0A0C4DH29 117 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 TMEM272A0A1B0GTI8 110 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 SMIM30A4D0T7 59 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 LDLRAD4O15165 306 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 SPINT2O43291 252 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 FBXO24O75426 580 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 CA11O75493 328 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 ARL6IP5O75915 188 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 CSF1P09603 554 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 FAM106CPP0CH98 169 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 ARSBP15848 533 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 TMEM11P17152 192 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 PSMA1P25786 263 aaKnown RBP6.44□□□□□ -1.38
VTI1B-206ENST00000556461 BLVRBP30043 206 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-206ENST00000556461 PPP1CCP36873 323 aaKnown RBP6.44□□□□□ -1.38
VTI1B-206ENST00000556461 RAB7AP51149 207 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 ARHGDIBP52566 201 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 ZNF816Q0VGE8 651 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-206ENST00000556461 HES1Q14469 280 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 HMGN3Q15651 99 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 C2orf68Q2NKX9 166 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 C2orf76Q3KRA6 126 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 MORN2Q502X0 79 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 ARSJQ5FYB0 599 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-206ENST00000556461 C9orf152Q5JTZ5 239 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 HES5Q5TA89 166 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 ZNF880Q6PDB4 577 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 CD200R1LQ6Q8B3 271 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 SLC25A48Q6ZT89 311 aaKnown RBP6.44□□□□□ -1.38
VTI1B-206ENST00000556461 NR2C2APQ86WQ0 139 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 OR8H3Q8N146 312 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 FAM89BQ8N5H3 189 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 C5orf56Q8N8D9 126 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 C8orf31Q8N9H6 132 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 KCNG3Q8TAE7 436 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 RTN4IP1Q8WWV3 396 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-206ENST00000556461 EAF1Q96JC9 268 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-206ENST00000556461 NEDD4LQ96PU5 975 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 OR2S2Q9NQN1 319 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 NDUFB11Q9NX14 153 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 AK3Q9UIJ7 227 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 MOB4Q9Y3A3 225 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 V9GY05 133 aa6.44□□□□□ -1.38
VTI1B-206ENST00000556461 TRDV1A0A1B0GX56 115 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 LINC01548A6NM66 108 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 NAPSAO96009 420 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 GAPDHP04406 335 aaKnown RBP6.43□□□□□ -1.38
VTI1B-206ENST00000556461 PSMB9P28065 219 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 OR3A3P47888 321 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 VEGFCP49767 419 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 ZNF137PP52743 207 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 DEFA6Q01524 100 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 EBI3Q14213 229 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 MOGAT2Q3SYC2 334 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 Q3ZCU0 254 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 PLAC9Q5JTB6 97 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 UBE2UQ5VVX9 321 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 C22orf42Q6IC83 251 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 TRAT1Q6PIZ9 186 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 OR2W3Q7Z3T1 314 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 C1QL4Q86Z23 238 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 ODF3L1Q8IXM7 274 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 SVOPQ8N4V2 548 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 Q8N6K4 173 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 OR5AU1Q8NGC0 362 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 FAM3DQ96BQ1 224 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 ARHGAP5-AS1Q96IT6 56 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 AKR1E2Q96JD6 320 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 PARP12Q9H0J9 701 aaKnown RBP6.43□□□□□ -1.38
VTI1B-206ENST00000556461 PLSCR3Q9NRY6 295 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 PLEKHJ1Q9NW61 149 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 LINC00527Q9UJ94 153 aa6.43□□□□□ -1.38
VTI1B-206ENST00000556461 RRP15Q9Y3B9 282 aaKnown RBP6.43□□□□□ -1.38
VTI1B-206ENST00000556461 TRAV1-2A0A0B4J238 106 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 A0A1W2PRX2 142 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 MRPS14O60783 128 aaKnown RBP6.42□□□□□ -1.38
VTI1B-206ENST00000556461 PEX14O75381 377 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 F2RL1P55085 397 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 HTD2P86397 168 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 CD83Q01151 205 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 TMEM30BQ3MIR4 351 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 ZNF773Q6PK81 442 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 CENPVQ7Z7K6 275 aaPredicted RBP6.42□□□□□ -1.38
VTI1B-206ENST00000556461 IZUMO1Q8IYV9 350 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 DTX3Q8N9I9 347 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 Q8N9W7 124 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 SETD6Q8TBK2 473 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 RITA1Q96K30 269 aa6.42□□□□□ -1.38
VTI1B-206ENST00000556461 NOL4LQ96MY1 436 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms