RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TMEM50BP56557 158 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 ZNF121P58317 390 aaPredicted RBP4.26□□□□□ -1.73
SRP54-211ENST00000556445 TAS2R20P59543 309 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 RIPPLY1Q0D2K3 151 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 ENDOGQ14249 297 aaKnown RBP4.26□□□□□ -1.73
SRP54-211ENST00000556445 SLC36A2Q495M3 483 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 FAM74A3Q4VXF1 159 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 GLYATL3Q5SZD4 288 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 C9orf135Q5VTT2 229 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 ZNF324BQ6AW86 544 aaPredicted RBP4.26□□□□□ -1.73
SRP54-211ENST00000556445 IGFL2Q6UWQ7 119 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 CLEC18BQ6UXF7 455 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 Q6ZSR3 168 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 UTS2BQ765I0 119 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 SLC16A14Q7RTX9 510 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 APRG1Q8IVJ8 170 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 LINC00518Q8N0U6 118 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 JAGN1Q8N5M9 183 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 INO80EQ8NBZ0 244 aaPredicted RBP4.26□□□□□ -1.73
SRP54-211ENST00000556445 RELL2Q8NC24 303 aaPredicted RBP4.26□□□□□ -1.73
SRP54-211ENST00000556445 PRSS33Q8NF86 280 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 OR1M1Q8NGA1 313 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 OR10A7Q8NGE5 316 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 OR51D1Q8NGF3 324 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 OR51A4Q8NGJ6 313 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 OR10AC1Q8NH08 325 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 OR56B4Q8NH76 319 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 YIPF5Q969M3 257 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 PIGTQ969N2 578 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 NABP1Q96AH0 204 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 FGGYQ96C11 551 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 SLC25A38Q96DW6 304 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 ZNF799Q96GE5 643 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 ZFP3Q96NJ6 502 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 URM1Q9BTM9 101 aaKnown RBP4.26□□□□□ -1.73
SRP54-211ENST00000556445 TRAF4Q9BUZ4 470 aaPredicted RBP4.26□□□□□ -1.73
SRP54-211ENST00000556445 METTL8Q9H825 291 aaKnown RBP4.26□□□□□ -1.73
SRP54-211ENST00000556445 TMEM38BQ9NVV0 291 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 TAS2R4Q9NYW5 299 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 CACNA1HO95180 2353 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 PHF3Q92576 2039 aaKnown RBP4.26□□□□□ -1.73
SRP54-211ENST00000556445 CNTRLQ7Z7A1 2325 aa4.26□□□□□ -1.73
SRP54-211ENST00000556445 NCOA6Q14686 2063 aaPredicted RBP4.25□□□□□ -1.73
SRP54-211ENST00000556445 TRBV9A0A0B4J1U6 114 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 A0A1B0GTI1 187 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 A0A1W2PRD5 423 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 ANKRD20A5PA0PJZ0 165 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 PINLYPA6NC86 204 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 FAM166BA8MTA8 275 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 H7C417 338 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 TFECO14948 347 aaPredicted RBP4.25□□□□□ -1.73
SRP54-211ENST00000556445 TSPAN13O95857 204 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 CA1P00915 261 aaPredicted RBP4.25□□□□□ -1.73
SRP54-211ENST00000556445 IGLV3-1P01715 115 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 TCRBP04435 133 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 SERPINA5P05154 406 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 CD3GP09693 182 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 SPNP16150 400 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 GNLYP22749 145 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 CDK2P24941 298 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 HOXD3P31249 432 aaPredicted RBP4.25□□□□□ -1.73
SRP54-211ENST00000556445 RCVRNP35243 200 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 ZNF93P35789 620 aaPredicted RBP4.25□□□□□ -1.73
SRP54-211ENST00000556445 ARR3P36575 388 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 CBX5P45973 191 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 EIF2B2P49770 351 aaKnown RBP4.25□□□□□ -1.73
SRP54-211ENST00000556445 CLDN12P56749 244 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 MADCAM1Q13477 382 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 TNXAQ16473 311 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 CEACAM16Q2WEN9 425 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 LRRC37A5PQ49AS3 106 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 UTF1Q5T230 341 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 OLFML2AQ68BL7 652 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 Q6ZRG5 221 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 DNM1P46Q6ZS02 220 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 ZNF546Q86UE3 836 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 WDFY1Q8IWB7 410 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 ZNF100Q8IYN0 542 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 LRRC18Q8N456 261 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 ZADH2Q8N4Q0 377 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 OR8B12Q8NGG6 310 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 OR51E1Q8TCB6 317 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 CA5BP1Q8WTZ4 195 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 APH1AQ96BI3 265 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 MED30Q96HR3 178 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 NEDD4LQ96PU5 975 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 GPER1Q99527 375 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 S100A13Q99584 98 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 ZNF251Q9BRH9 671 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 CST11Q9H112 138 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 ATG5Q9H1Y0 275 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 ZDHHC11Q9H8X9 412 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 GPR84Q9NQS5 396 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 NECAP2Q9NVZ3 263 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 MTFP1Q9UDX5 166 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 KIF25Q9UIL4 384 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 ZNF221Q9UK13 617 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 PROCRQ9UNN8 238 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 PAM16Q9Y3D7 125 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 WIPI2Q9Y4P8 454 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms