RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 CAV2P51636 162 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 PJVKQ0ZLH3 352 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF266Q14584 549 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 CSRP2Q16527 193 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 TMEM176BQ3YBM2 270 aaPredicted RBP4.4□□□□□ -1.71
TMEM260-210ENST00000556422 INO80CQ6PI98 192 aaPredicted RBP4.4□□□□□ -1.71
TMEM260-210ENST00000556422 PPP1R32Q7Z5V6 425 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 SLAMF6Q96DU3 332 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 NRIP2Q9BQI9 281 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 SELENOIQ9C0D9 397 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 MAP1LC3BQ9GZQ8 125 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 TLNRD1Q9H1K6 362 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 OR51I2Q9H344 312 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 LYRM2Q9NU23 88 aaPredicted RBP4.4□□□□□ -1.71
TMEM260-210ENST00000556422 BET1LQ9NYM9 111 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 FBXO4Q9UKT5 387 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 DHDHQ9UQ10 334 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 DNAJC13O75165 2243 aa4.4□□□□□ -1.71
TMEM260-210ENST00000556422 DCHS1Q96JQ0 3298 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 TMEM272A0A1B0GTI8 110 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 LOC102725191A0A1B0GVB3 256 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 STK17BO94768 372 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 HPXP02790 462 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF823P16415 610 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 MDH2P40926 338 aaKnown RBP4.39□□□□□ -1.71
TMEM260-210ENST00000556422 GABRA2P47869 451 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 ST3GAL2Q16842 350 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 OLFML2AQ68BL7 652 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 SLC25A47Q6Q0C1 308 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 DOLPP1Q86YN1 238 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 OR4K17Q8NGC6 315 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 SLC25A43Q8WUT9 341 aaPredicted RBP4.39□□□□□ -1.71
TMEM260-210ENST00000556422 FAM3DQ96BQ1 224 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 PHYHIPLQ96FC7 376 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 WBP1Q96G27 269 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 SPRY4Q9C004 299 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF319Q9P2F9 582 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 HDGFL3Q9Y3E1 203 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 RFNGQ9Y644 331 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 IGHV2-70DA0A0C4DH43 119 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 OR2M5A3KFT3 312 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 G3V3Q6 166 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 OR2C1O95371 312 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 CLDN1O95832 211 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 IFNA1P01562 189 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 IGHG1P01857 330 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 ESDP10768 282 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF17P17021 662 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 PRDX2P32119 198 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 SSR4P51571 173 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 HNRNPA3P51991 378 aaKnown RBP4.39□□□□□ -1.71
TMEM260-210ENST00000556422 UCNP55089 124 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 UBA52P62987 128 aaKnown RBP4.39□□□□□ -1.71
TMEM260-210ENST00000556422 MEF2DQ14814 521 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 CD276Q5ZPR3 534 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 SFRP4Q6FHJ7 346 aaPredicted RBP4.39□□□□□ -1.71
TMEM260-210ENST00000556422 OPN5Q6U736 354 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 RNF144BQ7Z419 303 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 DTX1Q86Y01 620 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 DTWD2Q8NBA8 298 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 PTX4Q96A99 478 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 BTF3L4Q96K17 158 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 OXGR1Q96P68 337 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 RAB40CQ96S21 281 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 MAP1LC3CQ9BXW4 147 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 ATG5Q9H1Y0 275 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 ARRDC1-AS1Q9H2J1 176 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 CLN8Q9UBY8 286 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 NSG1A0A0A6YYJ2 146 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 IGHV3-15A0A0B4J1V0 119 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 LOC100289279A0A1B0GTE1 492 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 A0A1B0GTI1 187 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 E9PLN8 166 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 H7C417 338 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 PMS2P2O95744 297 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF883P0CG24 379 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 ZBTB25P24278 435 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 FOLR3P41439 243 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 TIRAPP58753 221 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 B3GALT5-AS1P59052 145 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 TAS2R30P59541 319 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 PAFAH1B2P68402 229 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 LINC00303Q3SY05 128 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 GLYATL3Q5SZD4 288 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 GLT8D1Q68CQ7 371 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 WDR82Q6UXN9 313 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF788Q6ZQV5 615 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 SLC35E3Q7Z769 313 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 RPS19BP1Q86WX3 136 aaKnown RBP4.39□□□□□ -1.71
TMEM260-210ENST00000556422 OR56B4Q8NH76 319 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 FCAMRQ8WWV6 532 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 ADAT3Q96EY9 351 aaPredicted RBP4.39□□□□□ -1.71
TMEM260-210ENST00000556422 MTFP1Q9UDX5 166 aa4.39□□□□□ -1.71
TMEM260-210ENST00000556422 OTOGLQ3ZCN5 2332 aa4.38□□□□□ -1.71
TMEM260-210ENST00000556422 TRAV39A0A0B4J263 110 aa4.38□□□□□ -1.71
TMEM260-210ENST00000556422 C5orf63A6NC05 138 aa4.38□□□□□ -1.71
TMEM260-210ENST00000556422 K7EN84 100 aa4.38□□□□□ -1.71
TMEM260-210ENST00000556422 RER1O15258 196 aa4.38□□□□□ -1.71
TMEM260-210ENST00000556422 H2BFMP0C1H6 154 aa4.38□□□□□ -1.71
TMEM260-210ENST00000556422 SP9P0CG40 484 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms