RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 RTL6Q6ICC9 239 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 OR2A2Q6IF42 318 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 LPCAT3Q6P1A2 487 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 FAM131AQ6UXB0 335 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 TFAP2EQ6VUC0 442 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 SPNS3Q6ZMD2 512 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 ADAMTSL5Q6ZMM2 481 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 AHSA2Q719I0 299 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 SSX7Q7RTT5 188 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 TMEM144Q7Z5S9 345 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 LRRC28Q86X40 367 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-209ENST00000556353 RDH10Q8IZV5 341 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 LGI3Q8N145 548 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 CA13Q8N1Q1 262 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 PLPP5Q8NEB5 264 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 OR8J3Q8NGG0 315 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 OR52H1Q8NGJ2 320 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 OR51F2Q8NH61 342 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 RFESDQ8TAC1 157 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 RDH11Q8TC12 318 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 NT5CQ8TCD5 201 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 FAM45AQ8TCE6 357 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 CA5BP1Q8WTZ4 195 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 RGP1Q92546 391 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-209ENST00000556353 RORBQ92753 470 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 C14orf144Q96I85 54 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 CAPZA3Q96KX2 299 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 JSRP1Q96MG2 331 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-209ENST00000556353 Q96MT0 163 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 HBEGFQ99075 208 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 ERVK-6Q9BXR3 956 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 TLNRD1Q9H1K6 362 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 ARV1Q9H2C2 271 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 TMEM38AQ9H6F2 299 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 ELOVL3Q9HB03 270 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 PTTG3PQ9NZH4 202 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 MAT2BQ9NZL9 334 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 SLC7A11Q9UPY5 501 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 FAM215AQ9Y5M1 114 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 CDH10Q9Y6N8 788 aa3.14□□□□□ -1.91
PRPF39-209ENST00000556353 DNAH3Q8TD57 4116 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 A0A1W2PRD5 423 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 CCDC160A6NGH7 325 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SDHDO14521 159 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SIVA1O15304 175 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 TAPBPO15533 448 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 OR1F1O43749 312 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 RP2O75695 350 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 TMEM50AO95807 157 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 TSPAN13O95857 204 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 CYB5R3P00387 301 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 IGHG4P01861 327 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 CLPSP04118 112 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 C8GP07360 202 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SLC35G6P0C7Q6 338 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 COX6B1P14854 86 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 B4GALT1P15291 398 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SAA4P35542 130 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SLC6A8P48029 635 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 CSNK1A1P48729 337 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 XKP51811 444 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 PLP1P60201 277 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 RANP62826 216 aaKnown RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 PJVKQ0ZLH3 352 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 MPPED2Q15777 294 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 CDNFQ49AH0 187 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 OR2B11Q5JQS5 317 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 OGFRL1Q5TC84 451 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 TMEM42Q69YG0 159 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 STUMQ69YW2 141 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 KCNIP4Q6PIL6 250 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 DGAT2L6Q6ZPD8 337 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 ZNF767PQ75MW2 155 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 ABHD13Q7L211 337 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 MOB1BQ7L9L4 216 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SLC36A1Q7Z2H8 476 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 THOC6Q86W42 341 aaKnown RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 RPS19BP1Q86WX3 136 aaKnown RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 ERI1Q8IV48 349 aaKnown RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 APRG1Q8IVJ8 170 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 STHQ8IWL8 128 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SLC35F6Q8N357 371 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 CDRT4Q8N9R6 151 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 ZFP62Q8NB50 900 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 INO80EQ8NBZ0 244 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 OR1M1Q8NGA1 313 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 OR1L4Q8NGR5 311 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 OR13D1Q8NGV5 346 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 OR5H6Q8NGV6 325 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 OR6N2Q8NGY6 317 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 OR10A6Q8NH74 314 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 OR5AK3PQ8NH89 298 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 CASTOR1Q8WTX7 329 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 MCHR2Q969V1 340 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 MAGOHBQ96A72 148 aaKnown RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 MS4A6EQ96DS6 147 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 SH3YL1Q96HL8 342 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-209ENST00000556353 VSTM2LQ96N03 204 aa3.13□□□□□ -1.91
PRPF39-209ENST00000556353 PDCD10Q9BUL8 212 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms