RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 MRPS16Q9Y3D3 137 aaKnown RBP9.33□□□□□ -0.92
ACTN1-216ENST00000556083 OR51B2Q9Y5P1 312 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 DLL1O00548 723 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 SOCS1O15524 211 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 FTH1P19P0C7X4 201 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 GZMMP51124 257 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 COTL1Q14019 142 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 FOXB2Q5VYV0 432 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 BPIFA4PQ86YQ2 179 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 METTL26Q96S19 204 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 ST6GALNAC2Q9UJ37 374 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 TUBD1Q9UJT1 453 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 RGPD4Q7Z3J3 1758 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 CELA2BP08218 269 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-216ENST00000556083 BTF3P20290 206 aaKnown RBP9.33□□□□□ -0.92
ACTN1-216ENST00000556083 HIST3H3Q16695 136 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 TMEM78Q5T7P6 136 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 TMEM251Q8N6I4 163 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 OR4P4Q8NGL7 312 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 OR10J6PQ8NGY7 276 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 BLNKQ8WV28 456 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 SIPA1L3O60292 1781 aaPredicted RBP9.32□□□□□ -0.92
ACTN1-216ENST00000556083 A0A0J9YW62 118 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 B9A039 149 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 TTRP02766 147 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 SMIM6P0DI80 62 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 CD1BP29016 333 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 CLDN18P56856 261 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 CEBPEQ15744 281 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 ZNF645Q8N7E2 425 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 LSM10Q969L4 123 aaKnown RBP9.32□□□□□ -0.92
ACTN1-216ENST00000556083 ZNF71Q9NQZ8 489 aaPredicted RBP9.32□□□□□ -0.92
ACTN1-216ENST00000556083 MRPS18CQ9Y3D5 142 aaKnown RBP9.32□□□□□ -0.92
ACTN1-216ENST00000556083 RNF115Q9Y4L5 304 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 LINC00862A6NCI5 91 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 PPP1R17O96001 155 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 FCGR3AP08637 254 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 TGFBR1P36897 503 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 TSPO2Q5TGU0 170 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 FAM90A1Q86YD7 464 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 WDR31Q8NA23 367 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 OR4C5Q8NGB2 326 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 STARD4Q96DR4 205 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 KCNK17Q96T54 332 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 PILRBQ9UKJ0 227 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 LIPGQ9Y5X9 500 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 IGHV3-43A0A0B4J1X8 118 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 IGHV3-43DP0DP04 118 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 LIMS1P48059 325 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 KNTC1P50748 2209 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 TMEM50BP56557 158 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 TUSC1Q2TAM9 212 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 CLEC9AQ6UXN8 241 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 WDFY1Q8IWB7 410 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 GBGT1Q8N5D6 347 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.32□□□□□ -0.92
ACTN1-216ENST00000556083 SAP25Q8TEE9 199 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 C2CD4CQ8TF44 421 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 MRPL32Q9BYC8 188 aaKnown RBP9.32□□□□□ -0.92
ACTN1-216ENST00000556083 V9GYH0 126 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 RP1L1Q8IWN7 2480 aaPredicted RBP9.32□□□□□ -0.92
ACTN1-216ENST00000556083 THSD7AQ9UPZ6 1657 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 SPINT1O43278 529 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 MEOX2P50222 304 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 TIAL1Q01085 375 aaKnown RBP eCLIP9.32□□□□□ -0.92
ACTN1-216ENST00000556083 OR9G1Q8NH87 305 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 PAXXQ9BUH6 204 aa9.32□□□□□ -0.92
ACTN1-216ENST00000556083 M0R2Z0 102 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 MUC1P15941 1255 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-216ENST00000556083 MFAP4P55083 255 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 C10orf128Q5T292 105 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 SPNS2Q8IVW8 549 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 BVESQ8NE79 360 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 GALNT14Q96FL9 552 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 ZFP30Q9Y2G7 519 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 SYNGR3O43761 229 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 MPZL1O95297 269 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 COX6CP09669 75 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 FAM157CP0CG43 387 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 PDLIM4P50479 330 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 MVDP53602 400 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 TCTAP57738 103 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 RPL8P62917 257 aaKnown RBP9.31□□□□□ -0.92
ACTN1-216ENST00000556083 RELQ04864 619 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-216ENST00000556083 KLRB1Q12918 225 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 OR1K1Q8NGR3 316 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 PRR7Q8TB68 274 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 SMIM10L1P0DMW3 83 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 PDZD11Q5EBL8 140 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 OR5AU1Q8NGC0 362 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 SMIM10Q96HG1 83 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 TMEM222Q9H0R3 208 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 ZNF430Q9H8G1 570 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-216ENST00000556083 CLEC5AQ9NY25 188 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 QSER1Q2KHR3 1735 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 TRBV23-1A0A0A0MS06 115 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 A0A1B0GTH9 108 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 SRSF10O75494 262 aaKnown RBP9.31□□□□□ -0.92
ACTN1-216ENST00000556083 PTBP3O95758 552 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms