RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SNX22Q96L94 193 aa6.94□□□□□ -1.3
ATXN3-235ENST00000556082 OR2V2Q96R30 315 aa6.94□□□□□ -1.3
ATXN3-235ENST00000556082 MRPL37Q9BZE1 423 aaKnown RBP6.94□□□□□ -1.3
ATXN3-235ENST00000556082 SHARPINQ9H0F6 387 aa6.94□□□□□ -1.3
ATXN3-235ENST00000556082 TAF9BQ9HBM6 251 aa6.94□□□□□ -1.3
ATXN3-235ENST00000556082 CCL28Q9NRJ3 127 aa6.94□□□□□ -1.3
ATXN3-235ENST00000556082 UFSP2Q9NUQ7 469 aa6.94□□□□□ -1.3
ATXN3-235ENST00000556082 PRR13Q9NZ81 148 aa6.94□□□□□ -1.3
ATXN3-235ENST00000556082 POLR3KQ9Y2Y1 108 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-235ENST00000556082 ANKRD11Q6UB99 2663 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-235ENST00000556082 SHANK1Q9Y566 2161 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 hCG_1807616A0A1W2PRN6 198 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 TAAR5O14804 337 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 MGST3O14880 152 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 DEDDO75618 318 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 IGHV1-46P01743 117 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 PSG2P11465 335 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 SLC25A6P12236 298 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 GZMHP20718 246 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 VDAC1P21796 283 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 F2RP25116 425 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 ASCL1P50553 236 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 HTD2P86397 168 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 COL10A1Q03692 680 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 RAB32Q13637 225 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 ATXN7L3Q14CW9 347 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-235ENST00000556082 LYZL2Q7Z4W2 148 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 SELENOHQ8IZQ5 122 aaKnown RBP6.93□□□□□ -1.3
ATXN3-235ENST00000556082 GCSAMQ8N6F7 178 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 CD177Q8N6Q3 437 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 SECTM1Q8WVN6 248 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 ST8SIA2Q92186 375 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 DCUN1D4Q92564 292 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 RRNAD1Q96FB5 475 aaKnown RBP6.93□□□□□ -1.3
ATXN3-235ENST00000556082 COQ2Q96H96 371 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 TP53RKQ96S44 253 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 SPIN2AQ99865 258 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 ARPC5LQ9BPX5 153 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 SPIN2BQ9BPZ2 258 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 SLC25A32Q9H2D1 315 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 PRORYQ9H606 182 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 PLEKHA2Q9HB19 425 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 FAM212BQ9NTI7 297 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-235ENST00000556082 GSKIPQ9P0R6 139 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 RNF7Q9UBF6 113 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 OR14J1Q9UGF5 321 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 ERRFI1Q9UJM3 462 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-235ENST00000556082 UBE2J1Q9Y385 318 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-235ENST00000556082 PTPRQQ9UMZ3 2332 aa6.93□□□□□ -1.3
ATXN3-235ENST00000556082 SVILO95425 2214 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 CEP295Q9C0D2 2601 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 IGKV1D-17A0A075B6S4 117 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 TRGV8A0A0C4DH27 118 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 IGHV3-64DA0A0J9YX35 117 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 C12orf77C9JDV5 145 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 E5RGE8 158 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 C15orf65H3BRN8 121 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 K7N7A8 449 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 ABCD4O14678 606 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 SPRY3O43610 288 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 IGLV2-14P01704 120 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 RRASP10301 218 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 EGR1P18146 543 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 CHRNB4P30926 498 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 CEACAM6P40199 344 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 EIF5AP63241 154 aaKnown RBP6.92□□□□□ -1.3
ATXN3-235ENST00000556082 TNFAIP6P98066 277 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-235ENST00000556082 BSPH1Q075Z2 132 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 AESQ08117 197 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 SMCO1Q147U7 214 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 ADIPOQQ15848 244 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 NMSQ5H8A3 153 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 KRBOX4Q5JUW0 171 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 GPR157Q5UAW9 335 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 TMEM268Q5VZI3 342 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 VHLLQ6RSH7 139 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 C5orf24Q7Z6I8 188 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 MOGAT3Q86VF5 341 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 ZNF695Q8IW36 515 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 FAM71E2Q8N5Q1 922 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 TCTEX1D1Q8N7M0 179 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 SLC35G3Q8N808 338 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 OR4D5Q8NGN0 318 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 OR1S1Q8NH92 325 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 ANGPTL6Q8NI99 470 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 LHFPL5Q8TAF8 219 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 ITLN1Q8WWA0 313 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 RBPMSQ93062 196 aaKnown RBP6.92□□□□□ -1.3
ATXN3-235ENST00000556082 SDSLQ96GA7 329 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 WFIKKN1Q96NZ8 548 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 FAM234AQ9H0X4 552 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 ESRP2Q9H6T0 727 aaKnown RBP6.92□□□□□ -1.3
ATXN3-235ENST00000556082 GCM1Q9NP62 436 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 RAB9BQ9NP90 201 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 OR5AC2Q9NZP5 309 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 OR1A1Q9P1Q5 309 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 NSG2Q9Y328 171 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 SPTBN2O15020 2390 aa6.92□□□□□ -1.3
ATXN3-235ENST00000556082 TRAV39A0A0B4J263 110 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms