RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CTXN2P0C2S0 81 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 PGA5P0DJD9 388 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 ZNF44P15621 663 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 ZNF250P15622 560 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 C4BPBP20851 252 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 ZBTB25P24278 435 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 PTAFRP25105 342 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 NPY4RP50391 375 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 KLF3P57682 345 aaPredicted RBP5.73□□□□□ -1.49
SLIRP-204ENST00000555890 GMFBP60983 142 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 ERVK11-1P61568 191 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 ZNF154Q13106 437 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 DHRS2Q13268 280 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 TMEM128Q5BJH2 165 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 SLC22A25Q6T423 547 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 DHRS11Q6UWP2 260 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 TMEM108Q6UXF1 575 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 WDR86Q86TI4 376 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 CCDC28AQ8IWP9 274 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 SUMF2Q8NBJ7 301 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 POC1AQ8NBT0 407 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 OR2T35Q8NGX2 323 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 ZNF488Q96MN9 340 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 OR2A7Q96R45 310 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 NRIP2Q9BQI9 281 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 ZNF2Q9BSG1 426 aaPredicted RBP5.73□□□□□ -1.49
SLIRP-204ENST00000555890 DPCDQ9BVM2 203 aaPredicted RBP5.73□□□□□ -1.49
SLIRP-204ENST00000555890 RASL12Q9NYN1 266 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 SHPKQ9UHJ6 478 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 MGAT4AQ9UM21 535 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 IGKV1D-8A0A087WSZ0 117 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 A0A087X0M5 115 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 TRBV6-6A0A0A6YYG2 114 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 A0A1B0GWJ7 208 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 A0A1B0GX30 115 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 OR5H14A6NHG9 310 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 TRDCB7Z8K6 153 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 SMLR1H3BR10 107 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 MLNRO43193 412 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 SFT2D2O95562 160 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 DIRAS3O95661 229 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 NAPSAO96009 420 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 TK1P04183 234 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 CTSDP07339 412 aaPredicted RBP5.72□□□□□ -1.49
SLIRP-204ENST00000555890 ZNF728P0DKX0 622 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 HLA-GP17693 338 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 DUSP1P28562 367 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 CD200P41217 278 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 HERV-K104P61576 105 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 SEC61A1P61619 476 aaKnown RBP5.72□□□□□ -1.49
SLIRP-204ENST00000555890 DHODHQ02127 395 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 FGL1Q08830 312 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 PPP1R1AQ13522 171 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 ABCA11PQ4W5N1 156 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 PAN3Q58A45 887 aaKnown RBP5.72□□□□□ -1.49
SLIRP-204ENST00000555890 AADACL3Q5VUY0 350 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 C17orf107Q6ZR85 190 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 MOB1BQ7L9L4 216 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 SGPP2Q8IWX5 399 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 RELL2Q8NC24 303 aaPredicted RBP5.72□□□□□ -1.49
SLIRP-204ENST00000555890 ADAD2Q8NCV1 583 aaKnown RBP5.72□□□□□ -1.49
SLIRP-204ENST00000555890 OR2Z1Q8NG97 314 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 COQ8AQ8NI60 647 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 CASTOR1Q8WTX7 329 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 MITD1Q8WV92 249 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 DYRK2Q92630 601 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 RDH5Q92781 318 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 MRGPRFQ96AM1 343 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 PIK3IP1Q96FE7 263 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 TMEM246Q9BRR3 403 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 GON7Q9BXV9 100 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 KRTAP4-2Q9BYR5 136 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 TLNRD1Q9H1K6 362 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 WDR13Q9H1Z4 485 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 C5orf66Q9H5L9 145 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 SLA2Q9H6Q3 261 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 MSL2Q9HCI7 577 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 Q9N2K0 584 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 CA10Q9NS85 328 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 TMEM160Q9NX00 188 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 TREM2Q9NZC2 230 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 COMMD9Q9P000 198 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 ZNF581Q9P0T4 197 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 FZR1Q9UM11 496 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 KCNIP3Q9Y2W7 256 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 HSPB11Q9Y547 144 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 KIAA1109Q2LD37 5005 aa5.72□□□□□ -1.49
SLIRP-204ENST00000555890 TRAV24A0A0B4J272 114 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 TEX13DA0A0J9YY54 714 aaPredicted RBP5.71□□□□□ -1.5
SLIRP-204ENST00000555890 hCG_1807616A0A1W2PRN6 198 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 ATP6V1G2-DDX39BF2Z307 99 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 SIRPB1O00241 398 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 SIX6O95475 246 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 HAND1O96004 215 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 GLRA1P23415 457 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 FCGR2CP31995 323 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 ASCL1P50553 236 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 SRSF3P84103 164 aaKnown RBP5.71□□□□□ -1.5
SLIRP-204ENST00000555890 CYCSP99999 105 aaKnown RBP5.71□□□□□ -1.5
SLIRP-204ENST00000555890 ZNF146Q15072 292 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms