RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CCL3L1P16619 93 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 FCGR2CP31995 323 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 CEACAM6P40199 344 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 RFX2P48378 723 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 ARHGDIBP52566 201 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 Q3ZCU0 254 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 ABCA11PQ4W5N1 156 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 IGSF11Q5DX21 431 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 IDO2Q6ZQW0 420 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 OVCH2Q7RTZ1 564 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 FGFRL1Q8N441 504 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 MINDY2Q8NBR6 621 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 RFESDQ8TAC1 157 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 TNFRSF14Q92956 283 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 CREB3L1Q96BA8 519 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 SLC25A21Q9BQT8 299 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-220ENST00000555634 ZNF2Q9BSG1 426 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-220ENST00000555634 TINAGL1Q9GZM7 467 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-220ENST00000555634 HEXA-AS1Q9H8Q6 139 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 HRASLSQ9HDD0 168 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 SLC2A8Q9NY64 477 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 POLR3KQ9Y2Y1 108 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-220ENST00000555634 PRRC2AP48634 2157 aaKnown RBP9.23□□□□□ -0.93
SHMT2-220ENST00000555634 NOTCH2Q04721 2471 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 C17orf98A8MV24 154 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 FAM157AC9JC47 383 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 C15orf65H3BRN8 121 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 IGHV1-8P0DP01 117 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 OMGP23515 440 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 LUMP51884 338 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-220ENST00000555634 PRRX1P54821 245 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 FXYD4P59646 89 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 SURF2Q15527 256 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-220ENST00000555634 TMEM249Q2WGJ8 235 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 TRIM16LQ309B1 348 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 PLA1AQ53H76 456 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 CYB5R2Q6BCY4 276 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 FAAP20Q6NZ36 180 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 PLET1Q6UQ28 207 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 C1orf122Q6ZSJ8 110 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 TCF23Q7RTU1 214 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 CMTM1Q8IZ96 169 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 SLC38A6Q8IZM9 456 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 CCDC71LQ8N9Z2 235 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 LY6G5BQ8NDX9 201 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 OR10V1Q8NGI7 309 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 OR51S1Q8NGJ8 323 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 OR10X1Q8NGY0 326 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 OR56B4Q8NH76 319 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 UBALD1Q8TB05 177 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 ZNF596Q8TC21 504 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 ZFAND1Q8TCF1 268 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 TOMM40LQ969M1 308 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 TMEM186Q96B77 213 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 ABHD14AQ9BUJ0 271 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 SUCNR1Q9BXA5 334 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 CLEC7AQ9BXN2 247 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 TMEM133Q9H2Q1 129 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 GHITMQ9H3K2 345 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 LINC00574Q9H8X3 128 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 GFOD1Q9NXC2 390 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 RDH8Q9NYR8 311 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 ZNF221Q9UK13 617 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 OR2W1Q9Y3N9 320 aa9.22□□□□□ -0.93
SHMT2-220ENST00000555634 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.21□□□□□ -0.932e-7■■■■□ 26.3
SHMT2-220ENST00000555634 ABCA2Q9BZC7 2435 aa9.21□□□□□ -0.93
SHMT2-220ENST00000555634 IGHV3-43A0A0B4J1X8 118 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 RNF212BA8MTL3 300 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 YPEL1O60688 119 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 PPYP01298 95 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 IGHV3-43DP0DP04 118 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 NFYAP23511 347 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-220ENST00000555634 PPP1CCP36873 323 aaKnown RBP9.21□□□□□ -0.94
SHMT2-220ENST00000555634 CEACAM3P40198 252 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 GPR12P47775 334 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 GNG10P50151 68 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 TAS2R31P59538 309 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 ARF6P62330 175 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 C17orf58Q2M2W7 97 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 VMO1Q7Z5L0 202 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 H1FOOQ8IZA3 346 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-220ENST00000555634 WFDC11Q8NEX6 87 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 OR52L2PQ8NGH6 319 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 OR9G1Q8NH87 305 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 TERB2Q8NHR7 220 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 GIMAP1Q8WWP7 306 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 MOB3AQ96BX8 217 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 YPEL2Q96QA6 119 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 SLC6A7Q99884 636 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 PCGF1Q9BSM1 259 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 HIF1ANQ9NWT6 349 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 OR1A1Q9P1Q5 309 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 INSIG2Q9Y5U4 225 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 MALRD1Q5VYJ5 2156 aa9.21□□□□□ -0.94
SHMT2-220ENST00000555634 ITPR2Q14571 2701 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 CREBBPQ92793 2442 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 IGKV1D-8A0A087WSZ0 117 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 PIGBOS1A0A0B4J2F0 54 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 ITGB1BP1O14713 200 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 SMAD7O15105 426 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms