RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 FUT6P51993 359 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 RBM11P57052 281 aaKnown RBP9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 LCN2P80188 198 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 BSXQ3C1V8 233 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 NRN1LQ496H8 165 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 TMEM41BQ5BJD5 291 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 TRIM61Q5EBN2 209 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 DCAF10Q5QP82 559 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 ZNF468Q5VIY5 522 aaPredicted RBP9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 C16orf82Q7Z2V1 217 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 YRDCQ86U90 279 aaKnown RBP9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 TMEM217Q8N7C4 229 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 Q8NFD4 153 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 ZNF665Q9H7R5 613 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 PRSS50Q9UI38 385 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 ST3GAL6Q9Y274 331 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 TIMM9Q9Y5J7 89 aa9.15□□□□□ -0.94
MTHFD1-210ENST00000555252 CABIN1Q9Y6J0 2220 aa9.15□□□□□ -0.95
MTHFD1-210ENST00000555252 IGKV1-27A0A075B6S5 117 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 ZNF705GA8MUZ8 300 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 SPRY1O43609 319 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 ANGPTL7O43827 346 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 TUSC2O75896 110 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 VENTXO95231 258 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 GLI4P10075 376 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 OTX2P32243 289 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 GALR1P47211 349 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 NUBP1P53384 320 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 HBG1P69891 147 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 HBG2P69892 147 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 PAX5Q02548 391 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 ZNF774Q6NX45 483 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 ZNF880Q6PDB4 577 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 C6orf15Q6UXA7 325 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 ZNF66Q6ZN08 573 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 TMEM45BQ96B21 275 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 FOXB1Q99853 325 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 SMIM7Q9BQ49 75 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 SNHG12Q9BXW3 62 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 MAGT1Q9H0U3 335 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 SLC7A10Q9NS82 523 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 GAB2Q9UQC2 676 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 LAMP3Q9UQV4 416 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 CHD3Q12873 2000 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 KIR2DS1A0A191URI9 304 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 FAM221AA4D161 298 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 PATE3B3GLJ2 98 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 CXCL13O43927 109 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 CNOT4O95628 575 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 NRASP01111 189 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 LINC00614P0C842 121 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 ZNF32P17041 273 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 KIR2DS4P43632 304 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 TDGF1P3P51864 188 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 CLDN15P56746 228 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 KIR2DS1Q14954 304 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 LRRC75BQ2VPJ9 315 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 ZNF837Q96EG3 531 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 OR2H1Q9GZK4 316 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 TAAR3PQ9P1P4 343 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 KIAA2026Q5HYC2 2103 aa9.14□□□□□ -0.95
MTHFD1-210ENST00000555252 ASCC3Q8N3C0 2202 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 LRRC3CA6NJW4 275 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 MARCH11A6NNE9 402 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 CEBPZOSA8MTT3 80 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 CYB561P49447 251 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 IDH3GP51553 393 aaPredicted RBP9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 MEF2BQ02080 365 aaPredicted RBP9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 PIGYQ3MUY2 71 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 DMRTC1Q5HYR2 192 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 SPIN3Q5JUX0 258 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 KCNIP4Q6PIL6 250 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 DTX1Q86Y01 620 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 GBGT1Q8N5D6 347 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 NAXEQ8NCW5 288 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 OR10D3Q8NH80 312 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 LSM10Q969L4 123 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 STRADBQ9C0K7 418 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 OR51I2Q9H344 312 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 ZNF442Q9H7R0 627 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 GPR35Q9HC97 309 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 OR6C3Q9NZP0 311 aa9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 BOKQ9UMX3 212 aaPredicted RBP9.13□□□□□ -0.95
MTHFD1-210ENST00000555252 IGKV1-12A0A0C4DH73 117 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 MAP1LC3B2A6NCE7 125 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 ZNF737O75373 536 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 TRAPPC6AO75865 159 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 IGKV1D-12P01611 117 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 HLA-HP01893 362 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 ZNF883P0CG24 379 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 CD99P14209 185 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 OR10J1P30954 320 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 APLNRP35414 380 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 RPL23P62829 140 aaKnown RBP9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 PSG4Q00888 419 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 Q0VFX4 171 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 ADIRFQ15847 76 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 ZNF726P1Q15940 193 aa9.12□□□□□ -0.95
MTHFD1-210ENST00000555252 ZNF818PQ6ZRF7 136 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms