RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ZNF565Q8N9K5 539 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 BEST4Q8NFU0 473 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 OR51S1Q8NGJ8 323 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 OR13C8Q8NGS7 320 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 OR4K15Q8NH41 348 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 COQ2Q96H96 371 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 SIRPDQ9H106 197 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 NCOR1P1Q9H4R4 102 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 RAB9BQ9NP90 201 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 KIF25Q9UIL4 384 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 FLVCR2Q9UPI3 526 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 YLPM1P49750 1951 aaKnown RBP8.95□□□□□ -0.98
SHMT2-218ENST00000555213 TRAV39A0A0B4J263 110 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 CENPXA8MT69 81 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 GSTT2P0CG29 244 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 FAM157CP0CG43 387 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 MMP9P14780 707 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 CCL3L1P16619 93 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 HRH1P35367 487 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 MRPS15P82914 257 aaKnown RBP8.95□□□□□ -0.98
SHMT2-218ENST00000555213 VAX1Q5SQQ9 334 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 C6orf183Q5T699 404 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 RSBN1Q5VWQ0 802 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-218ENST00000555213 TRAT1Q6PIZ9 186 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 DHRS11Q6UWP2 260 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 CADM3Q8N126 398 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 OR5AP2Q8NGF4 316 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 TBX15Q96SF7 602 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 DPAGT1Q9H3H5 408 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 CHMP1AQ9HD42 196 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-218ENST00000555213 SIRT7Q9NRC8 400 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 TAS2R3Q9NYW6 316 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 ANXA10Q9UJ72 324 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF221Q9UK13 617 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 NUP50Q9UKX7 468 aa8.95□□□□□ -0.98
SHMT2-218ENST00000555213 IGKV1-6A0A0C4DH72 117 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF729A6NN14 1252 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-218ENST00000555213 POM121CA8CG34 1229 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 SDCBPO00560 298 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-218ENST00000555213 NDUFB6O95139 128 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 AVPP01185 164 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 SCTP09683 121 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 RCC1P18754 421 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-218ENST00000555213 EPHA1P21709 976 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 PRTN3P24158 256 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 FPR2P25090 351 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 MECP2P51608 486 aaKnown RBP8.94□□□□□ -0.98
SHMT2-218ENST00000555213 BPIFB3P59826 476 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 AADACL3Q5VUY0 350 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 C1orf229Q6ZS94 237 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-218ENST00000555213 MOB1BQ7L9L4 216 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 LHFPL1Q86WI0 220 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 ENKURQ8TC29 256 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 CORO2AQ92828 525 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 LHX4Q969G2 390 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 MS4A7Q9GZW8 240 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-218ENST00000555213 RIMS4Q9H426 269 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-218ENST00000555213 HEXA-AS1Q9H8Q6 139 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 UNKLQ9H9P5 680 aaKnown RBP8.94□□□□□ -0.98
SHMT2-218ENST00000555213 C12orf4Q9NQ89 552 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 IFT46Q9NQC8 304 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 MBNL3Q9NUK0 354 aaKnown RBP8.94□□□□□ -0.98
SHMT2-218ENST00000555213 SLC2A8Q9NY64 477 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 KCNIP1Q9NZI2 227 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 TRAPPC2LQ9UL33 140 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 NUBP2Q9Y5Y2 271 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 WNK2Q9Y3S1 2297 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 FBN3Q75N90 2809 aa8.94□□□□□ -0.98
SHMT2-218ENST00000555213 hCG_2014768A0A024R1R8 64 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 TRAV6A0A075B6T7 132 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 MEX3AA1L020 520 aaKnown RBP8.93□□□□□ -0.98
SHMT2-218ENST00000555213 C17orf98A8MV24 154 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 INMT-MINDY4F8WBC2 141 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 FSHBP01225 129 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 AMY2AP04746 511 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 CGB3P0DN86 165 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 CGB7P0DN87 165 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 HOXB4P17483 251 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-218ENST00000555213 TBPP20226 339 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 GZMHP20718 246 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 MEF2DQ14814 521 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 HERPUD1Q15011 391 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF782Q6ZMW2 699 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-218ENST00000555213 TCF23Q7RTU1 214 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 OR13D1Q8NGV5 346 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 MRGPRDQ8TDS7 321 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 CREB3L1Q96BA8 519 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 MCUBQ9NWR8 336 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 CALYQ9NYX4 217 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 SESN1Q9Y6P5 492 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 DOCK11Q5JSL3 2073 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 FN1P02751 2386 aaKnown RBP8.93□□□□□ -0.98
SHMT2-218ENST00000555213 NAV3Q8IVL0 2385 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 VPS13CQ709C8 3753 aa8.93□□□□□ -0.98
SHMT2-218ENST00000555213 IGHV3OR16-10A0A075B7F0 116 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 IGHV1-69DA0A0B4J2H0 117 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 KBTBD11-OT1A0A1B0GTJ5 212 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 OR5H14A6NHG9 310 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 TRDCB7Z8K6 153 aa8.92□□□□□ -0.98
SHMT2-218ENST00000555213 SPINT2O43291 252 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms