RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 GAPTQ8N292 157 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 ZNF565Q8N9K5 539 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 MRGPRDQ8TDS7 321 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 NICN1Q9BSH3 213 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 LPAR5Q9H1C0 372 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 CALYQ9NYX4 217 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 ZNRD1Q9P1U0 126 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 STEAP1Q9UHE8 339 aa11.55□□□□□ -0.56
SHMT2-217ENST00000555116 IGHV2-26A0A0B4J1V2 119 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 HMX3A6NHT5 357 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 RNASE1P07998 156 aaKnown RBP11.54□□□□□ -0.56
SHMT2-217ENST00000555116 OMGP23515 440 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 SLC6A1P30531 599 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 SCAND1P57086 179 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 C2orf76Q3KRA6 126 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 LDLRAD2Q5SZI1 272 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 TMEM86BQ8N661 226 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 OR6F1Q8NGZ6 308 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 SMIM4Q8WVI0 70 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 DYRK2Q92630 601 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 S100A16Q96FQ6 103 aaKnown RBP11.54□□□□□ -0.56
SHMT2-217ENST00000555116 MARVELD1Q9BSK0 173 aa11.54□□□□□ -0.56
SHMT2-217ENST00000555116 NPIPB11E5RHQ5 1161 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 H3BUI4 141 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 ARG1P05089 322 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 TRAPPC2P0DI81 140 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 TRAPPC2BP0DI82 140 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 CD34P28906 385 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 IER3P46695 156 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 PLA1AQ53H76 456 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 RNASE12Q5GAN4 147 aaKnown RBP11.53□□□□□ -0.56
SHMT2-217ENST00000555116 UTF1Q5T230 341 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 OR52W1Q6IF63 320 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 LHFPL4Q7Z7J7 247 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 FAM89BQ8N5H3 189 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 BEND2Q8NDZ0 799 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 SSMEM1Q8WWF3 244 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 CLEC7AQ9BXN2 247 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 A0A087X0M5 115 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 TMEM272A0A1B0GTI8 110 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 A0A1B0GX30 115 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 UBE2QL1A1L167 161 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 FOXI3A8MTJ6 420 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-217ENST00000555116 CA11O75493 328 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 IGHV4-59P01825 116 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 BTCP35070 178 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 PLA2G7Q13093 441 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 NKAPLQ5M9Q1 402 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 TOMM5Q8N4H5 51 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 CCDC107Q8WV48 283 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 CREB3L1Q96BA8 519 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 KIRREL1Q96J84 757 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 SULT4A1Q9BR01 284 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 URM1Q9BTM9 101 aaKnown RBP11.53□□□□□ -0.56
SHMT2-217ENST00000555116 MEGF9Q9H1U4 602 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 ZNF286AQ9HBT8 521 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 TBL2Q9Y4P3 447 aaKnown RBP11.53□□□□□ -0.56
SHMT2-217ENST00000555116 POMT1Q9Y6A1 747 aa11.53□□□□□ -0.56
SHMT2-217ENST00000555116 C15orf65H3BRN8 121 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 SOCS1O15524 211 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 GSTT2P0CG29 244 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 GSTT2BP0CG30 244 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 GZMHP20718 246 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 PAX6P26367 422 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 HLA-DMAP28067 261 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 SSTR5P35346 364 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 LGALS4P56470 323 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 TATDN3Q17R31 274 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 C6orf201Q7Z4U5 140 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 RTN4RL2Q86UN3 420 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 DYNAPQ8N1N2 210 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 ABHD12Q8N2K0 398 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 RFESDQ8TAC1 157 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 CHIAQ9BZP6 476 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 AUNIPQ9H7T9 357 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 TNFRSF19Q9NS68 423 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 IDI2-AS1Q9NZ38 188 aa11.52□□□□□ -0.57
SHMT2-217ENST00000555116 FAM172BPA6NC97 362 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 CENPXA8MT69 81 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 GABARAPH6UMI1 98 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 ORC5O43913 435 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 BLVRBP30043 206 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-217ENST00000555116 MNDAP41218 407 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 KLF9Q13886 244 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-217ENST00000555116 TMEM69Q5SWH9 247 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 OR10A7Q8NGE5 316 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 OR4K15Q8NH41 348 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 ST6GAL2Q96JF0 529 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 FAAP24Q9BTP7 215 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 RAB22AQ9UL26 194 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 ALG5Q9Y673 324 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 STAB1Q9NY15 2570 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 INMT-MINDY4F8WBC2 141 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 TPPPO94811 219 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 IGLV1-47P01700 117 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 NFYBP25208 207 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 EFNB2P52799 333 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 TMEM50BP56557 158 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 DYRK1AQ13627 763 aa11.51□□□□□ -0.57
SHMT2-217ENST00000555116 MINOS1Q5TGZ0 78 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms