RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 ZNF880Q6PDB4 577 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 ZNF709Q8N972 641 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 LINC00470Q9BZP3 86 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 SLC2A9Q9NRM0 540 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 E9PLN8 166 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 OR5H8P0DN80 308 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 SPACA3Q8IXA5 215 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 TMEM100Q9NV29 134 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 KCNIP1Q9NZI2 227 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 IGKV1-9A0A0C4DH69 117 aa14.24□□□□□ -0.13
PCNX1-209ENST00000554879 CELA3BP08861 270 aa14.24□□□□□ -0.13
PCNX1-209ENST00000554879 ATPAF1Q5TC12 328 aaPredicted RBP14.24□□□□□ -0.13
PCNX1-209ENST00000554879 LEMD1Q68G75 181 aa14.24□□□□□ -0.13
PCNX1-209ENST00000554879 PECRQ9BY49 303 aa14.24□□□□□ -0.13
PCNX1-209ENST00000554879 SERPINE3A8MV23 424 aa14.24□□□□□ -0.13
PCNX1-209ENST00000554879 DHODHQ02127 395 aa14.24□□□□□ -0.13
PCNX1-209ENST00000554879 TMEM268Q5VZI3 342 aa14.24□□□□□ -0.13
PCNX1-209ENST00000554879 OR2Z1Q8NG97 314 aa14.24□□□□□ -0.13
PCNX1-209ENST00000554879 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.24□□□□□ -0.13
PCNX1-209ENST00000554879 FUT3P21217 361 aa14.24□□□□□ -0.13
PCNX1-209ENST00000554879 MALSU1Q96EH3 234 aa14.24□□□□□ -0.13
PCNX1-209ENST00000554879 CDIPTO14735 213 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 SPRY3O43610 288 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 FHITP49789 147 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 FOXF2Q12947 444 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 DHRS7CA6NNS2 312 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 IRF2P14316 349 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 BCL3P20749 454 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 TAS2R31P59538 309 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 DLK1P80370 383 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 SAT2Q96F10 170 aaPredicted RBP14.23□□□□□ -0.13
PCNX1-209ENST00000554879 SDSLQ96GA7 329 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 MMP9P14780 707 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 ERVS71-1P61550 626 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 H3BQ15 152 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 JTBO76095 146 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 ZNF728P0DKX0 622 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 BTNL3Q6UXE8 466 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 MS4A10Q96PG2 267 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 SYT3Q9BQG1 590 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 FAM103A1Q9BTL3 118 aaKnown RBP14.23□□□□□ -0.13
PCNX1-209ENST00000554879 ARV1Q9H2C2 271 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 CACFD1Q9UGQ2 172 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 POLDIP2Q9Y2S7 368 aa14.23□□□□□ -0.13
PCNX1-209ENST00000554879 RNF222A6NCQ9 220 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 CRHP06850 196 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 ERASQ7Z444 233 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 C10orf35Q96D05 121 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 BTF3L4Q96K17 158 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 DYNLRB1Q9NP97 96 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 NECAP2Q9NVZ3 263 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 FKBP11Q9NYL4 201 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 RAXQ9Y2V3 346 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 TIMM8BQ9Y5J9 83 aaPredicted RBP14.22□□□□□ -0.13
PCNX1-209ENST00000554879 ATP23Q9Y6H3 246 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 INTS1Q8N201 2190 aaKnown RBP14.22□□□□□ -0.13
PCNX1-209ENST00000554879 IGKV3D-15A0A087WSY6 115 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 H2AFB1P0C5Y9 115 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 GLRA1P23415 457 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 NEU1Q99519 415 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 PRDM13Q9H4Q3 707 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 IGHV1-2P23083 117 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 GNMTQ14749 295 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 ZNF260Q3ZCT1 412 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 TMEM217Q8N7C4 229 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 TBX15Q96SF7 602 aa14.22□□□□□ -0.13
PCNX1-209ENST00000554879 FAM90A27PA6NNH2 459 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 ZNF345Q14585 488 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 IGFBP7Q16270 282 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 PNLIPRP3Q17RR3 467 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 C1orf185Q5T7R7 199 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 ZNF664Q8N3J9 261 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 OR2G3Q8NGZ4 309 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 GNG13Q9P2W3 67 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 TRAV39A0A0B4J263 110 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HGFACQ04756 655 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 INO80CQ6PI98 192 aaPredicted RBP14.21□□□□□ -0.13
PCNX1-209ENST00000554879 TAAR6Q96RI8 345 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 ZDHHC11Q9H8X9 412 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 CACNA1AO00555 2505 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 C9orf170A2RU37 121 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HIST1H2BKO60814 126 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HIST1H2BJP06899 126 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HIST1H2BOP23527 126 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HIST1H2BBP33778 126 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 NPBWR2P48146 333 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HIST1H2BDP58876 126 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HIST1H2BCP62807 126 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 SSBP1Q04837 148 aaKnown RBP14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HIST2H2BEQ16778 126 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 ACSF3Q4G176 576 aaPredicted RBP14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.21□□□□□ -0.13
PCNX1-209ENST00000554879 Q6ZT83 130 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HIST1H2BHQ93079 126 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HIST1H2BNQ99877 126 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 HIST1H2BMQ99879 126 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 PARD6GQ9BYG4 376 aaPredicted RBP14.21□□□□□ -0.13
PCNX1-209ENST00000554879 FBXL17Q9UF56 701 aa14.21□□□□□ -0.13
PCNX1-209ENST00000554879 H0YL77 283 aa14.21□□□□□ -0.14
PCNX1-209ENST00000554879 PDCD6O75340 191 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms