RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CTSEP14091 401 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 PPP1CCP36873 323 aaKnown RBP1.5□□□□□ -2.17
SCFD1-213ENST00000554776 C1QTNF8P60827 252 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 TPM4P67936 248 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 GTF2BQ00403 316 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 EXOC3L4Q17RC7 722 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 MESTQ5EB52 335 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 MTERF4Q7Z6M4 381 aaKnown RBP1.5□□□□□ -2.17
SCFD1-213ENST00000554776 RPRMLQ8N4K4 120 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 GALMQ96C23 342 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 RBP7Q96R05 134 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 PKMYT1Q99640 499 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 ZNF426Q9BUY5 554 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 UGT2B28Q9BY64 529 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 METTL9Q9H1A3 318 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 C15orf41Q9Y2V0 281 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 CARHSP1Q9Y2V2 147 aaKnown RBP1.5□□□□□ -2.17
SCFD1-213ENST00000554776 WASHC3Q9Y3C0 194 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 CACNA1SQ13698 1873 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 MYO5BQ9ULV0 1848 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 SPATA31E1Q6ZUB1 1445 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 TRIOBPQ9H2D6 2365 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 ZBED9Q6R2W3 1325 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 IGLV10-54A0A075B6I4 117 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 A0A1B0GU33 70 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 D6RAR5 112 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 E7EQL1 145 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 AZIN1O14977 448 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 OCMP0CE72 109 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-213ENST00000554776 OR13C7P0DN81 318 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 PSKH1P11801 424 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 CRABP1P29762 137 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 PSMB3P49720 205 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 COTL1Q14019 142 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 OR8G1Q15617 311 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 MAPK14Q16539 360 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 TBC1D28Q2M2D7 210 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 HLA-DRB5Q30154 266 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 CD302Q8IX05 232 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 FAM9CQ8IZT9 166 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 LY6G5BQ8NDX9 201 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 OR5L1Q8NGL2 311 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 OR10D4PQ8NGN7 298 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 OR5C1Q8NGR4 320 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 CMTM2Q8TAZ6 248 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 DDI1Q8WTU0 396 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 PPCDCQ96CD2 204 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 SMIM12Q96EX1 92 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 OR8B2Q96RD0 313 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 MED18Q9BUE0 208 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 GTSF1LQ9H1H1 148 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 C11orf49Q9H6J7 331 aa1.49□□□□□ -2.17
SCFD1-213ENST00000554776 ZNHIT6Q9NWK9 470 aaKnown RBP1.49□□□□□ -2.17
SCFD1-213ENST00000554776 MCTS1Q9ULC4 181 aaKnown RBP1.49□□□□□ -2.17
SCFD1-213ENST00000554776 LTBP4Q8N2S1 1624 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 IGHV3OR15-7A0A075B7D8 119 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 A0A1W2PNM2 257 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 IGSF23A1L1A6 192 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 C3orf84H3BNL1 204 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 CCRL2O00421 344 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 ITGB1BP1O14713 200 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 SOX14O95416 240 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 OPN1SWP03999 348 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 CRYGDP07320 174 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 UGT2B7P16662 529 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 CXCL2P19875 107 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 CXCL3P19876 107 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 CDK9P50750 372 aaKnown RBP1.48□□□□□ -2.17
SCFD1-213ENST00000554776 PDK2Q15119 407 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 CST6Q15828 149 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 SDHAF4Q5VUM1 108 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 PLEKHG7Q6ZR37 379 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 ATP5L2Q7Z4Y8 100 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 MFSD8Q8NHS3 518 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 ERMNQ8TAM6 284 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 STOML3Q8TAV4 291 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 TNFAIP8L1Q8WVP5 186 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 RAD51AP1Q96B01 352 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 HIGD2AQ9BW72 106 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 MROQ9BYG7 248 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 MRPL16Q9NX20 251 aaKnown RBP1.48□□□□□ -2.17
SCFD1-213ENST00000554776 TMEM216Q9P0N5 145 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 GLS2Q9UI32 602 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 DNAJC12Q9UKB3 198 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.48□□□□□ -2.17
SCFD1-213ENST00000554776 ATP6V1DQ9Y5K8 247 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 LCTP09848 1927 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
SCFD1-213ENST00000554776 RAD50Q92878 1312 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 SHANK3Q9BYB0 1731 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 TRPM3Q9HCF6 1732 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-213ENST00000554776 TINCRA0A1B0GVN0 87 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 VPS37CA5D8V6 355 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-213ENST00000554776 A8MWP6 167 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 GOLGA8KD6RF30 607 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 GOLGA8MH3BSY2 632 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 ZW10O43264 779 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 PSCAO43653 123 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 CTSGP08311 255 aa1.47□□□□□ -2.17
SCFD1-213ENST00000554776 AGTR1P30556 359 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms