RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 RAB3CQ96E17 227 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 SELENOIQ9C0D9 397 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 BANF2Q9H503 90 aa8.56□□□□□ -1.04
SHMT2-215ENST00000554656 IGKV1-12A0A0C4DH73 117 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 FAM240BA0A1B0GVZ2 78 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 A0A1W2PP11 408 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 NOS1APO75052 506 aaPredicted RBP8.55□□□□□ -1.04
SHMT2-215ENST00000554656 IGKV1D-12P01611 117 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 PRB2P02812 416 aaPredicted RBP8.55□□□□□ -1.04
SHMT2-215ENST00000554656 OPN1MWP04001 364 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 GLAP06280 429 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 PGA5P0DJD9 388 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 OPN1MW2P0DN77 364 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 OPN1MW3P0DN78 364 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 TBPP20226 339 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 BLVRBP30043 206 aaPredicted RBP8.55□□□□□ -1.04
SHMT2-215ENST00000554656 SLC6A1P30531 599 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 RCVRNP35243 200 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 KIR2DS4P43632 304 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 DLX6P56179 175 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 TMEM50BP56557 158 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 RBM11P57052 281 aaKnown RBP8.55□□□□□ -1.04
SHMT2-215ENST00000554656 RPL31P62899 125 aaKnown RBP8.55□□□□□ -1.04
SHMT2-215ENST00000554656 MPV17LQ2QL34 196 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 MOGAT2Q3SYC2 334 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 KPRPQ5T749 579 aaPredicted RBP8.55□□□□□ -1.04
SHMT2-215ENST00000554656 SAMD5Q5TGI4 173 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 TMEM200BQ69YZ2 307 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 SLC25A26Q70HW3 274 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 LHFPL4Q7Z7J7 247 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 TMEM229BQ8NBD8 167 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 CHST4Q8NCG5 386 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 NICN1Q9BSH3 213 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 ZNF702PQ9H963 129 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 ANAPC10Q9UM13 185 aa8.55□□□□□ -1.04
SHMT2-215ENST00000554656 TMEM235A6NFC5 223 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 SOCS1O15524 211 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 AKAIN1P0CW23 69 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 NAT1P18440 290 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 COX7A1P24310 79 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 PRDX2P32119 198 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 TAS2R19P59542 299 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 GNG2P59768 71 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 HABP2Q14520 560 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-215ENST00000554656 AANATQ16613 207 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 SMIM21Q3B7S5 101 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 PLET1Q6UQ28 207 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 ZNF782Q6ZMW2 699 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-215ENST00000554656 LYG1Q8N1E2 194 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 OR4C13Q8NGP0 309 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 OR10K1Q8NGX5 313 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 NRIP2Q9BQI9 281 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 OCSTAMPQ9BR26 566 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 PECRQ9BY49 303 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 RANBP3Q9H6Z4 567 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-215ENST00000554656 IFT22Q9H7X7 185 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 SPACA1Q9HBV2 294 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 HES4Q9HCC6 221 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 SERTAD4Q9NUC0 356 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 RASL12Q9NYN1 266 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 KLK11Q9UBX7 282 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 ST3GAL6Q9Y274 331 aa8.54□□□□□ -1.04
SHMT2-215ENST00000554656 DNAH3Q8TD57 4116 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 A0A1B0GVG6 124 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 MEX3AA1L020 520 aaKnown RBP8.53□□□□□ -1.04
SHMT2-215ENST00000554656 ADARB2-AS1A8MUL3 147 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 ODF3BA8MYP8 253 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 PDCD6O75340 191 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 CD74P04233 296 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 PTHLHP12272 177 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 FUT3P21217 361 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 CHATP28329 748 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 ERVK11-1P61568 191 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 PLA1AQ53H76 456 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 ACTBL2Q562R1 376 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 RNASE12Q5GAN4 147 aaKnown RBP8.53□□□□□ -1.04
SHMT2-215ENST00000554656 PLAC9Q5JTB6 97 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 Q6ZPA2 131 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 TCF23Q7RTU1 214 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 ZNF561Q8N587 486 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 WIPF2Q8TF74 440 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-215ENST00000554656 CREB3L1Q96BA8 519 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 ARHGAP5-AS1Q96IT6 56 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 NEDD4LQ96PU5 975 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 MARVELD1Q9BSK0 173 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 CHST6Q9GZX3 395 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 SEBOXQ9HB31 216 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-215ENST00000554656 HRASLSQ9HDD0 168 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 MTCH1Q9NZJ7 389 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 RCC2Q9P258 522 aaKnown RBP8.53□□□□□ -1.04
SHMT2-215ENST00000554656 NUBP2Q9Y5Y2 271 aa8.53□□□□□ -1.04
SHMT2-215ENST00000554656 LINC00854A0A1B0GVQ3 168 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 C17orf98A8MV24 154 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 F8VVB4 439 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 F8VWA3 439 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 NXPH2O95156 264 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 TK1P04183 234 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 VSIG10L2P0DP72 767 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 SPNP16150 400 aa8.52□□□□□ -1.05
SHMT2-215ENST00000554656 GNB3P16520 340 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms