RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 IFITM5A6NNB3 132 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 SDCBPO00560 298 aaPredicted RBP6.96□□□□□ -1.3
ACTN1-213ENST00000554508 SPINT2O43291 252 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 BPNT1O95861 308 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 MPIG6BO95866 241 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 IGHV3-7P01780 117 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 OPN1MWP04001 364 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 GAPDHP04406 335 aaKnown RBP6.96□□□□□ -1.3
ACTN1-213ENST00000554508 CLEC2LP0C7M8 214 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 OPN1MW2P0DN77 364 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 OPN1MW3P0DN78 364 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 CD37P11049 281 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 RANBP1P43487 201 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 GNG10P50151 68 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 LOXL3P58215 753 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 VBP1P61758 197 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 NCS1P62166 190 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 ZNF816Q0VGE8 651 aaPredicted RBP6.96□□□□□ -1.3
ACTN1-213ENST00000554508 ABCA11PQ4W5N1 156 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 PDLIM3Q53GG5 364 aaPredicted RBP6.96□□□□□ -1.3
ACTN1-213ENST00000554508 C6orf183Q5T699 404 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 OR10K2Q6IF99 312 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 CENPVQ7Z7K6 275 aaPredicted RBP6.96□□□□□ -1.3
ACTN1-213ENST00000554508 ANKRD13BQ86YJ7 626 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 CLVS1Q8IUQ0 354 aaPredicted RBP6.96□□□□□ -1.3
ACTN1-213ENST00000554508 OR4F17Q8NGA8 305 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 OR5AU1Q8NGC0 362 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 OR51D1Q8NGF3 324 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 LEAP2Q969E1 77 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 OR4F4Q96R69 305 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 NAA50Q9GZZ1 169 aaKnown RBP6.96□□□□□ -1.3
ACTN1-213ENST00000554508 KCNK15Q9H427 330 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 STEAP1Q9UHE8 339 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 TRAPPC2LQ9UL33 140 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 MOB4Q9Y3A3 225 aa6.96□□□□□ -1.3
ACTN1-213ENST00000554508 MEGF8Q7Z7M0 2845 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 A0A1W2PPI3 338 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 NOTOA8MTQ0 251 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 FGF16O43320 207 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 NOL3O60936 208 aaKnown RBP6.95□□□□□ -1.3
ACTN1-213ENST00000554508 GABARAPO95166 117 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 AMY1AP04745 511 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 AMY2AP04746 511 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 LPLP06858 475 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 SNRNP70P08621 437 aaKnown RBP6.95□□□□□ -1.3
ACTN1-213ENST00000554508 VSIG8P0DPA2 414 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 SLC2A2P11168 524 aaPredicted RBP6.95□□□□□ -1.3
ACTN1-213ENST00000554508 TMEM11P17152 192 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 IL3RAP26951 378 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 SERPINB10P48595 397 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 CD83Q01151 205 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 EBI3Q14213 229 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 HES1Q14469 280 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 NSUN5P1Q3KNT7 163 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 TMEM95Q3KNT9 176 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 C2orf76Q3KRA6 126 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 IDNKQ5T6J7 187 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 STEAP3Q658P3 488 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 SFXN4Q6P4A7 337 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 ZNF554Q86TJ5 538 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 NR2C2APQ86WQ0 139 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 DRAM1Q8N682 238 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 TMEM104Q8NE00 496 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 OR4K15Q8NH41 348 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 OR56B4Q8NH76 319 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 KCNG3Q8TAE7 436 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 FAM3DQ96BQ1 224 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 CITED2Q99967 270 aaPredicted RBP6.95□□□□□ -1.3
ACTN1-213ENST00000554508 KCNIP1Q9NZI2 227 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 DAPK2Q9UIK4 370 aa6.95□□□□□ -1.3
ACTN1-213ENST00000554508 PRKDCP78527 4128 aaKnown RBP6.95□□□□□ -1.3
ACTN1-213ENST00000554508 A0A0B4J203 849 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 IGHV1-3A0A0C4DH29 117 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 A0A1W2PPE3 182 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 UBE2QL1A1L167 161 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 CCDC160A6NGH7 325 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 ADARB2-AS1A8MUL3 147 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 C12orf77C9JDV5 145 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 HSD17B6O14756 317 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 TXNL1O43396 289 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 PDCD6O75340 191 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 HBZP02008 142 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 RPS19P39019 145 aaKnown RBP6.94□□□□□ -1.3
ACTN1-213ENST00000554508 RPS27AP62979 156 aaKnown RBP6.94□□□□□ -1.3
ACTN1-213ENST00000554508 UNC119Q13432 240 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 DIAPH2-AS1Q14236 149 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 CTF1Q16619 201 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 FBLN7Q53RD9 439 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 C9orf152Q5JTZ5 239 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 HIST2H2BDQ6DRA6 164 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 SIGIRRQ6IA17 410 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 SLC25A48Q6ZT89 311 aaKnown RBP6.94□□□□□ -1.3
ACTN1-213ENST00000554508 OR2W3Q7Z3T1 314 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 MOB3BQ86TA1 216 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 CROCCP3Q8IVE0 287 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 LYG1Q8N1E2 194 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 UBALD1Q8TB05 177 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 ST6GALNAC6Q969X2 333 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 R3HDM4Q96D70 268 aa6.94□□□□□ -1.3
ACTN1-213ENST00000554508 NEDD4LQ96PU5 975 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms