RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SSX2Q16385 188 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 LY6EQ16553 131 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 LDLRAD2Q5SZI1 272 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 AWAT2Q6E213 333 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 DTX3Q8N9I9 347 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 ZNF565Q8N9K5 539 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 SUMF2Q8NBJ7 301 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 OR4C13Q8NGP0 309 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 ZNF596Q8TC21 504 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 UQCC2Q9BRT2 126 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 MMP28Q9H239 520 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 SPACA1Q9HBV2 294 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 TCF19Q9Y242 345 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 RNF114Q9Y508 228 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 KBTBD11-OT1A0A1B0GTJ5 212 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 HMX3A6NHT5 357 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 CENPXA8MT69 81 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 GABARAPH6UMI1 98 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 PAX6P26367 422 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 SLC6A1P30531 599 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 PROK1P58294 105 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 DGCR2P98153 550 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 DYRK1AQ13627 763 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 FAM189A2Q15884 450 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 C17orf58Q2M2W7 97 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 PRR31Q5SQ13 230 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 C1orf100Q5SVJ3 147 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 GLIPR1L1Q6UWM5 242 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 LYPD6Q86Y78 171 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 DYNAPQ8N1N2 210 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 ABHD12Q8N2K0 398 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 TOMM5Q8N4H5 51 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 OR4P4Q8NGL7 312 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 OR6M1Q8NGM8 313 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 OR13A1Q8NGR1 328 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 PLPPR1Q8TBJ4 325 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 PIFOQ8TCI5 191 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 CREB3L1Q96BA8 519 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 KIRREL1Q96J84 757 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 MARVELD1Q9BSK0 173 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 NPFFR1Q9GZQ6 430 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 LINC00574Q9H8X3 128 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 CALYQ9NYX4 217 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 PITPNC1Q9UKF7 332 aa10.55□□□□□ -0.72
SHMT2-211ENST00000554310 A0A1W2PP11 408 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 TMEM30CPA0ZSE6 113 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A10PA6NDY2 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A18PA6NE21 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A16PA6NEW6 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A20PA6NIJ5 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A7PA6NKC0 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A22PA8MWA6 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A12PA8MX19 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A5PA8MXJ8 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A23PA8MXZ1 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 F2RL2O00254 374 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 CHST1O43916 411 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 IGLV1-47P01700 117 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 CD3GP09693 182 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A15PP0C7V4 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A13PP0C7W8 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A14PP0C7W9 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM90A24PP0C7X0 464 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 CGB3P0DN86 165 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 CGB7P0DN87 165 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 HLA-DMAP28067 261 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 GDNFP39905 211 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 ARHGDIBP52566 201 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 PLA1AQ53H76 456 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 TMEM69Q5SWH9 247 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 SLC35E4Q6ICL7 350 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 C11orf88Q6PI97 169 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 BRICD5Q6PL45 260 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 OR10A7Q8NGE5 316 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FAM3DQ96BQ1 224 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 CITED1Q99966 193 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 CST11Q9H112 138 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 ZNF286AQ9HBT8 521 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 ZNF581Q9P0T4 197 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 RCC2Q9P258 522 aaKnown RBP10.54□□□□□ -0.72
SHMT2-211ENST00000554310 COPZ2Q9P299 210 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 DPM3Q9P2X0 92 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 GHRLQ9UBU3 117 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 FBLN5Q9UBX5 448 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 MRPS7Q9Y2R9 242 aaKnown RBP10.54□□□□□ -0.72
SHMT2-211ENST00000554310 RBMX2Q9Y388 322 aaKnown RBP10.54□□□□□ -0.72
SHMT2-211ENST00000554310 HILPDAQ9Y5L2 63 aa10.54□□□□□ -0.72
SHMT2-211ENST00000554310 LEUTXA8MZ59 168 aa10.53□□□□□ -0.72
SHMT2-211ENST00000554310 H3BUI4 141 aa10.53□□□□□ -0.72
SHMT2-211ENST00000554310 TOR1AO14656 332 aa10.53□□□□□ -0.72
SHMT2-211ENST00000554310 XRCC3O43542 346 aa10.53□□□□□ -0.72
SHMT2-211ENST00000554310 ORC5O43913 435 aa10.53□□□□□ -0.72
SHMT2-211ENST00000554310 UBBP0CG47 229 aa10.53□□□□□ -0.72
SHMT2-211ENST00000554310 MGMTP16455 207 aa10.53□□□□□ -0.72
SHMT2-211ENST00000554310 HTR2CP28335 458 aa10.53□□□□□ -0.72
SHMT2-211ENST00000554310 CEACAM3P40198 252 aa10.53□□□□□ -0.72
SHMT2-211ENST00000554310 TAS2R20P59543 309 aa10.53□□□□□ -0.72
SHMT2-211ENST00000554310 CD300CQ08708 224 aa10.53□□□□□ -0.72
SHMT2-211ENST00000554310 KLF9Q13886 244 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-211ENST00000554310 RBM39Q14498 530 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms