RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 FMODQ06828 376 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 MYBPHQ13203 477 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 MFAP5Q13361 173 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 PMS2P11Q13670 270 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM187Q14656 261 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 PLPPR5Q32ZL2 321 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM176BQ3YBM2 270 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 NKAIN1Q4KMZ8 207 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 SLC22A6Q4U2R8 563 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 KHDC3LQ587J8 217 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 KRBOX4Q5JUW0 171 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 C1orf189Q5VU69 101 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM211Q6ICI0 200 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 HEPN1Q6WQI6 88 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 FBXW12Q6X9E4 464 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 ASCL4Q6XD76 172 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 PRR22Q8IZ63 422 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 BOLLQ8N9W6 283 aaKnown RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM104Q8NE00 496 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 OR10S1Q8NGN2 331 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 OR8U1Q8NH10 309 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 C2CD4CQ8TF44 421 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 SECTM1Q8WVN6 248 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 RTN4IP1Q8WWV3 396 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 MAFIPQ8WZ33 124 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 TSLPQ969D9 159 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 MOB3AQ96BX8 217 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 THOC3Q96J01 351 aaKnown RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 C18orf12Q96KH6 178 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 PFDN5Q99471 154 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 P2RX4Q99571 388 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 NIPSNAP3BQ9BS92 247 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 ADAT1Q9BUB4 502 aaKnown RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 PAPOLGQ9BWT3 736 aaKnown RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 VN1R1Q9GZP7 353 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 RIMS4Q9H426 269 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM231Q9H6L2 316 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 PLEKHF2Q9H8W4 249 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 WDR54Q9H977 334 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF160Q9HCG1 818 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 PNRC2Q9NPJ4 139 aaKnown RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF701Q9NV72 531 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 ABI3Q9P2A4 366 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 B3GAT1Q9P2W7 334 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 DHCR7Q9UBM7 475 aaKnown RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 MIOXQ9UGB7 285 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 NXT1Q9UKK6 140 aaKnown RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 HIVEP1P15822 2718 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 ITPR3Q14573 2671 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 SETD2Q9BYW2 2564 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 MED13LQ71F56 2210 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 CSMD2Q7Z408 3487 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 A0A087WWL8 130 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 RBFOX3A6NFN3 312 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF850A8MQ14 1090 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF587BE7ETH6 402 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 TSTD3H0UI37 97 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 K7N7A8 449 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 LMX1BO60663 402 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 ZFAND5O76080 213 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 CLDN14O95500 239 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 DIRAS3O95661 229 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 IFNA1P01562 189 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 SPTBP11277 2137 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 HLA-DOBP13765 273 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 CD99P14209 185 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF17P17021 662 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 UCP1P25874 307 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 HTR5AP47898 357 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 KRTAP10-9P60411 292 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 PCBD1P61457 104 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 VAMP2P63027 116 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 MRPS34P82930 218 aaKnown RBP5.04□□□□□ -1.6
VPS33B-203ENST00000554264 DEFA6Q01524 100 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 FOXF1Q12946 379 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 IL24Q13007 206 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 KIAA0141Q14154 515 aaPredicted RBP5.04□□□□□ -1.6
VPS33B-203ENST00000554264 RAB35Q15286 201 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF506Q5JVG8 444 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 FAM209BQ5JX69 171 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 LINC00696Q6ZRV3 163 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 FAM57BQ71RH2 274 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 GALNTL5Q7Z4T8 443 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 LINC00596Q86U02 117 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 SAXO1Q8IYX7 474 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 C1orf87Q8N0U7 546 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 ZFP82Q8N141 532 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 OR2C3Q8N628 320 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF321PQ8N8H1 164 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 M1APQ8TC57 530 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 CD300LFQ8TDQ1 290 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 GTF3AQ92664 365 aaKnown RBP5.04□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM54Q969K7 222 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 CPNE4Q96A23 557 aaPredicted RBP5.04□□□□□ -1.6
VPS33B-203ENST00000554264 TVP23CQ96ET8 276 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 FAM71F1Q96KD3 344 aaPredicted RBP5.04□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM56Q96MV1 263 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 YPEL4Q96NS1 127 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 TAAR6Q96RI8 345 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 SSX3Q99909 188 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms