RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 R4GMQ9 66 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 TRAV8-7A0A075B6U6 113 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 OR2AT4A6NND4 320 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 PRR32B1ATL7 298 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 KRBOX1C9JBD0 128 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 PSMD9O00233 223 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 B3GALNT1O75752 331 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 OPN1MWP04001 364 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 RLN1P04808 185 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 ALDOBP05062 364 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 CHRM2P08172 466 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 UBCP0CG48 685 aaKnown RBP7.2□□□□□ -1.26
TDP1-208ENST00000553989 OPN1MW2P0DN77 364 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 OPN1MW3P0DN78 364 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 HLA-GP17693 338 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 KIR3DL2P43630 455 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 POU3F4P49335 361 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 EXOSC2Q13868 293 aaKnown RBP7.2□□□□□ -1.26
TDP1-208ENST00000553989 LRRC75BQ2VPJ9 315 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 BEAN1Q3B7T3 259 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 NSUN5P1Q3KNT7 163 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 FBLN7Q53RD9 439 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 NHLRC3Q5JS37 347 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 ATPAF1Q5TC12 328 aaPredicted RBP7.2□□□□□ -1.26
TDP1-208ENST00000553989 C11orf88Q6PI97 169 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 ZNF788Q6ZQV5 615 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 TMUB2Q71RG4 321 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 COMMD2Q86X83 199 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 ZDHHC23Q8IYP9 409 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 C12orf45Q8N5I9 185 aaPredicted RBP7.2□□□□□ -1.26
TDP1-208ENST00000553989 OR2AK2Q8NG84 335 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 OR51D1Q8NGF3 324 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 OR5D13Q8NGL4 314 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 OR10Z1Q8NGY1 313 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 MRAPQ8TCY5 172 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 SCARB1Q8WTV0 552 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 RNF133Q8WVZ7 376 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 TNFRSF14Q92956 283 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 UQCC2Q9BRT2 126 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 ABHD6Q9BV23 337 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 NPFFR1Q9GZQ6 430 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 TLNRD1Q9H1K6 362 aa7.2□□□□□ -1.26
TDP1-208ENST00000553989 A0A1W2PPH5 198 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 H3BUI4 141 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 BET1O15155 118 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 SIGLEC5O15389 551 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 MPC2O95563 127 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 RAB3DO95716 219 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 CD74P04233 296 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 ACAA1P09110 424 aaPredicted RBP7.19□□□□□ -1.26
TDP1-208ENST00000553989 AMY2BP19961 511 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 ANXA7P20073 488 aaKnown RBP7.19□□□□□ -1.26
TDP1-208ENST00000553989 TBPP20226 339 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 COX7A1P24310 79 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 GPM6AP51674 278 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 EFNB2P52799 333 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 LGALS4P56470 323 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 AANATQ16613 207 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 SLC51BQ86UW2 128 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 COMMD7Q86VX2 200 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 LYG1Q8N1E2 194 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 ZNRF1Q8ND25 227 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 CCDC54Q8NEL0 328 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 OR4S1Q8NGB4 309 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 OR5D14Q8NGL3 314 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 OR4C16Q8NGL9 310 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 PPP1R35Q8TAP8 253 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 LRRC20Q8TCA0 184 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 OR5P3Q8WZ94 311 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 SCGB3A2Q96PL1 93 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 PRRT1Q99946 306 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 SEC22CQ9BRL7 303 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 TMEM138Q9NPI0 162 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 RDH8Q9NYR8 311 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 ZNF319Q9P2F9 582 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 PFDN2Q9UHV9 154 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 OR52A1Q9UKL2 312 aa7.19□□□□□ -1.26
TDP1-208ENST00000553989 PRKDCP78527 4128 aaKnown RBP7.18□□□□□ -1.26
TDP1-208ENST00000553989 TRBV23-1A0A0A0MS06 115 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 TMEM272A0A1B0GTI8 110 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 TMEM269A0A1B0GVZ9 245 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 hCG_1809904A0A1W2PP81 198 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 A0A1W2PPE2 198 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 RPS10-NUDT3A0A1W2PQS6 291 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 A0A1W2PR64 198 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 A0A1W2PRV1 198 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 RFPL4AA6NLU0 287 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 ZNF736B4DX44 427 aaPredicted RBP7.18□□□□□ -1.26
TDP1-208ENST00000553989 ZNF732B4DXR9 585 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 RFPL4AL1F8VTS6 287 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 LDLRAD4O15165 306 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 RHBDL1O75783 438 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 HTR3BO95264 441 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 CYB5AP00167 134 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 CST4P01036 141 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 SLC25A4P12235 298 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 RPA2P15927 270 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 ACKR3P25106 362 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 PAX6P26367 422 aa7.18□□□□□ -1.26
TDP1-208ENST00000553989 BDKRB2P30411 391 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms