RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ZNF137PP52743 207 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 DSCR9P59020 149 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 PPP1R1AQ13522 171 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 ESCO2Q56NI9 601 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 FAM201AQ5SY85 155 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 SP5Q6BEB4 398 aaPredicted RBP9□□□□□ -0.97
PABPN1-203ENST00000553960 NLRC3Q7RTR2 1065 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 SGPP2Q8IWX5 399 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 CMTM1Q8IZ96 169 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 ZNF295-AS1Q8N0V1 137 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 BATF2Q8N1L9 274 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 C12orf45Q8N5I9 185 aaPredicted RBP9□□□□□ -0.97
PABPN1-203ENST00000553960 OR2AK2Q8NG84 335 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 OR10V1Q8NGI7 309 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 TNFRSF14Q92956 283 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 DACT3Q96B18 629 aaPredicted RBP9□□□□□ -0.97
PABPN1-203ENST00000553960 RAB39BQ96DA2 213 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 NEIL1Q96FI4 390 aaPredicted RBP9□□□□□ -0.97
PABPN1-203ENST00000553960 TMEM56Q96MV1 263 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 PSMG3-AS1Q96PY0 264 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 CCL13Q99616 98 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 PHB2Q99623 299 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 DCTN5Q9BTE1 182 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 RAB18Q9NP72 206 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 ING3Q9NXR8 418 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 CALYQ9NYX4 217 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 RPUSD1Q9UJJ7 312 aaKnown RBP9□□□□□ -0.97
PABPN1-203ENST00000553960 RALYQ9UKM9 306 aaKnown RBP9□□□□□ -0.97
PABPN1-203ENST00000553960 LAMP3Q9UQV4 416 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 TMEM56-RWDD3S4R434 201 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 DCHS2Q6V1P9 2916 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 SPG11Q96JI7 2443 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 ARID1AO14497 2285 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 IGHV3OR15-7A0A075B7D8 119 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 A0A1W2PPH5 198 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 FAM172BPA6NC97 362 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 C17orf98A8MV24 154 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 HSPB6O14558 160 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 MPPED1O15442 326 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 ADAM20O43506 726 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 IGLV2-14P01704 120 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 SLC25A6P12236 298 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 ANXA3P12429 323 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 RPA2P15927 270 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 UCP1P25874 307 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 IL2RGP31785 369 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 RAP2BP61225 183 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 RPL31P62899 125 aaKnown RBP8.99□□□□□ -0.97
PABPN1-203ENST00000553960 CYCSP99999 105 aaKnown RBP8.99□□□□□ -0.97
PABPN1-203ENST00000553960 MORN2Q502X0 79 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 FAM71F2Q6NXP2 309 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 ZNF66Q6ZN08 573 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 KIR3DL3Q8N743 410 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 ZNF645Q8N7E2 425 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 FAM216BQ8N7L0 139 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 ZNF439Q8NDP4 499 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 OR11H7Q8NGC8 314 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 RTN4IP1Q8WWV3 396 aaPredicted RBP8.99□□□□□ -0.97
PABPN1-203ENST00000553960 ARL11Q969Q4 196 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 TMPRSS13Q9BYE2 586 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 NAA60Q9H7X0 242 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 GFOD1Q9NXC2 390 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 RDH8Q9NYR8 311 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 CTSZQ9UBR2 303 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 ZNF69Q9UC07 566 aa8.99□□□□□ -0.97
PABPN1-203ENST00000553960 AKAP6Q13023 2319 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 PPIAL4CA0A0B4J2A2 164 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 IGKV1D-13A0A0B4J2D9 117 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 RNF212BA8MTL3 300 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 VWC2LB2RUY7 222 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 H0Y980 276 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 DVL1O14640 695 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 BET1O15155 118 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 RBFOX2O43251 390 aaKnown RBP eCLIP8.98□□□□□ -0.973e-9■■■□□ 16.9
PABPN1-203ENST00000553960 CCNKO75909 580 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 CDS2O95674 445 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 IFNA2P01563 188 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 HLA-AP01891 365 aaKnown RBP8.98□□□□□ -0.97
PABPN1-203ENST00000553960 LIPFP07098 398 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 IGKV1-13P0DP09 117 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 NFYAP23511 347 aaPredicted RBP8.98□□□□□ -0.97
PABPN1-203ENST00000553960 F2RP25116 425 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 CEACAM6P40199 344 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 ARHGDIBP52566 201 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 PIGPP57054 158 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 TAGLNQ01995 201 aaKnown RBP8.98□□□□□ -0.97
PABPN1-203ENST00000553960 IL15RAQ13261 267 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 C4orf46Q504U0 113 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 WDR25Q64LD2 544 aaPredicted RBP8.98□□□□□ -0.97
PABPN1-203ENST00000553960 TMEM200BQ69YZ2 307 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 SLC25A48Q6ZT89 311 aaKnown RBP8.98□□□□□ -0.97
PABPN1-203ENST00000553960 LRRC75A-AS1Q8N1F1 130 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 C11orf42Q8N5U0 333 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 ADAD2Q8NCV1 583 aaKnown RBP8.98□□□□□ -0.97
PABPN1-203ENST00000553960 OR5M8Q8NGP6 311 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 OR1L1Q8NH94 360 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 COQ8AQ8NI60 647 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 MRGPRDQ8TDS7 321 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 GLYATL2Q8WU03 294 aa8.98□□□□□ -0.97
PABPN1-203ENST00000553960 CAPSLQ8WWF8 208 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms