RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 SHPKQ9UHJ6 478 aa10.68□□□□□ -0.7
VIPAS39-206ENST00000553888 WIPI2Q9Y4P8 454 aa10.68□□□□□ -0.7
VIPAS39-206ENST00000553888 C12orf77C9JDV5 145 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 PRDX2P32119 198 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 SSTR5P35346 364 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 S100A12P80511 92 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 TNFAIP6P98066 277 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 GNMTQ14749 295 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 TESK1Q15569 626 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 IAH1Q2TAA2 248 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 ANKHD1Q8IWZ3 2542 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 DEFB108BQ8NET1 73 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 RFESDQ8TAC1 157 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 DCUN1D4Q92564 292 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 VRK1Q99986 396 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 CABLES2Q9BTV7 478 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 NMES1Q9C002 83 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 GCM1Q9NP62 436 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 TANC2Q9HCD6 1990 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 C3orf85A0A1B0GTC6 90 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 MED19A0JLT2 244 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 MSGN1A6NI15 193 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 ZNF98A6NK75 572 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 NUDT19A8MXV4 375 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 HSPA12AO43301 675 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 SPDEFO95238 335 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 PLAUP00749 431 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 RPA2P15927 270 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 RPS23P62266 143 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 ADORA2A-AS1P86434 159 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 ALKAL2Q6UX46 152 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 ST6GALNAC3Q8NDV1 305 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 OR13A1Q8NGR1 328 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 THAP6Q8TBB0 222 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 C2orf50Q96LR7 162 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 PRORYQ9H606 182 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 MBNL3Q9NUK0 354 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 PCDHB10Q9UN67 800 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 KCNIP3Q9Y2W7 256 aa10.67□□□□□ -0.7
VIPAS39-206ENST00000553888 IGHV3-43A0A0B4J1X8 118 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 IGHV3-43DP0DP04 118 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 CASP6P55212 293 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 RAB14P61106 215 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 FGL1Q08830 312 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 LTC4SQ16873 150 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 ZNF767PQ75MW2 155 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 NUP37Q8NFH4 326 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 OR52L2PQ8NGH6 319 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 ASB13Q8WXK3 278 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 GALNT14Q96FL9 552 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 PLPPR2Q96GM1 343 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 GLS2Q9UI32 602 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 OR2W1Q9Y3N9 320 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 COL12A1Q99715 3063 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 TMEM30CPA0ZSE6 113 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 IGLV2-14P01704 120 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 SLC25A4P12235 298 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 CEACAM6P40199 344 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 HMGN3Q15651 99 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 LIAT1Q6ZQX7 453 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 DMRTC2Q8IXT2 367 aaPredicted RBP10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 FGFRL1Q8N441 504 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 SLC35G3Q8N808 338 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 OR51H1Q8NH63 302 aa10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 RALYQ9UKM9 306 aaKnown RBP10.66□□□□□ -0.7
VIPAS39-206ENST00000553888 GPR31O00270 319 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 OR8U9P0C7N5 309 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 SELENOVP59797 346 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 IL15RAQ13261 267 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 TMEM268Q5VZI3 342 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 GALNT11Q8NCW6 608 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 OR52M1Q8NGK5 317 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 OR8U1Q8NH10 309 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 RNF150Q9ULK6 438 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 PPP1R3CQ9UQK1 317 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 SHISA9B4DS77 424 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 ZNF737O75373 536 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 CTXN2P0C2S0 81 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 CCDC71LQ8N9Z2 235 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 OR1S1Q8NH92 325 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 PRR7Q8TB68 274 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 C18orf12Q96KH6 178 aa10.65□□□□□ -0.7
VIPAS39-206ENST00000553888 DEFB108AA8MXU0 73 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 PGLYRP1O75594 196 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 RP2O75695 350 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 LHBP01229 141 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 IGHV3-7P01780 117 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 HBZP02008 142 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 MZT1Q08AG7 82 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 TMEM65Q6PI78 240 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 OR10V1Q8NGI7 309 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 NARFLQ9H6Q4 476 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 KCNS2Q9ULS6 477 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 LSM5Q9Y4Y9 91 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 MAB21L2Q9Y586 359 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 E7EQL1 145 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 SIAH2O43255 324 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 NXPH3O95157 252 aa10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 PPP1CCP36873 323 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-206ENST00000553888 ASCL1P50553 236 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms