RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TREML4Q6UXN2 200 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 NLRC3Q7RTR2 1065 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 FAM216BQ8N7L0 139 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 ZNF565Q8N9K5 539 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 TERB2Q8NHR7 220 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 C20orf85Q9H1P6 137 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 MMP28Q9H239 520 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 SLC25A10Q9UBX3 287 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-208ENST00000553868 MIOXQ9UGB7 285 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 PCDHB10Q9UN67 800 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 TRGV10A0A0A0MS01 117 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 SDCBPO00560 298 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-208ENST00000553868 GPR37O15354 613 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 SPINT2O43291 252 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 NDUFB7P17568 137 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 GPR6P46095 362 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-208ENST00000553868 MEF2CQ06413 473 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-208ENST00000553868 SURF2Q15527 256 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-208ENST00000553868 CARTPTQ16568 116 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 Q6ZPA2 131 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 ZDHHC22Q8N966 263 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 GIMAP1Q8WWP7 306 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 UPRTQ96BW1 309 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 GALMQ96C23 342 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 CABLES2Q9BTV7 478 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 TAF9BQ9HBM6 251 aa11.95□□□□□ -0.5
SHMT2-208ENST00000553868 TRAV6A0A075B6T7 132 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 IGHV4-61A0A0C4DH41 118 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 hADV38S2A0JD32 116 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 FAM157AC9JC47 383 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 NPIPB11E5RHQ5 1161 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 PRAF2O60831 178 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 PEX14O75381 377 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 SCTP09683 121 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 RPS2P15880 293 aaKnown RBP11.94□□□□□ -0.5
SHMT2-208ENST00000553868 IL2RGP31785 369 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 PDLIM4P50479 330 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 HERV-K104P61576 105 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 TMEM30BQ3MIR4 351 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 AWAT1Q58HT5 328 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 DHRS11Q6UWP2 260 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 GLCCI1Q86VQ1 547 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 LHFPL1Q86WI0 220 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 OR8B3Q8NGG8 313 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 MRGPRDQ8TDS7 321 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 NEIL1Q96FI4 390 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-208ENST00000553868 OR8B2Q96RD0 313 aa11.94□□□□□ -0.5
SHMT2-208ENST00000553868 ZNF2Q9BSG1 426 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-208ENST00000553868 CEACAM18A8MTB9 384 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 DVL1O14640 695 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 ARPC1BO15143 372 aaKnown RBP11.93□□□□□ -0.5
SHMT2-208ENST00000553868 BET1O15155 118 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 HSPA12AO43301 675 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 RLN1P04808 185 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 SELLP14151 372 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 FPR2P25090 351 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 FCGR2CP31995 323 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 IGSF11Q5DX21 431 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 AVPI1Q5T686 147 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 LPCAT3Q6P1A2 487 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 OR13C8Q8NGS7 320 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 IL1F10Q8WWZ1 152 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 KIRREL1Q96J84 757 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 SLC23A1Q9UHI7 598 aa11.93□□□□□ -0.5
SHMT2-208ENST00000553868 UBE2J1Q9Y385 318 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-208ENST00000553868 hCG_2014768A0A024R1R8 64 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 TRBV6-7A0A0A0MS04 114 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 TRBV23-1A0A0A0MS06 115 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 TRAV39A0A0B4J263 110 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 A0A1B0GW55 424 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 FAM172BPA6NC97 362 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 C12orf77C9JDV5 145 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 HBZP02008 142 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 DUX4L2P0CJ85 424 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 DUX4L3P0CJ86 424 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 DUX4L4P0CJ87 422 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 DUX4L5P0CJ88 424 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 DUX4L6P0CJ89 424 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 DUX4L7P0CJ90 424 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 PGAM2P15259 253 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 ZBTB25P24278 435 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 NPY4RP50391 375 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 MECP2P51608 486 aaKnown RBP11.92□□□□□ -0.5
SHMT2-208ENST00000553868 TAS2R31P59538 309 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 DUX4L9Q6RFH8 374 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-208ENST00000553868 LYPD2Q6UXB3 125 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 PRR18Q8N4B5 295 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 OR13A1Q8NGR1 328 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 ZFAND1Q8TCF1 268 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 CORO2AQ92828 525 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 ARL11Q969Q4 196 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 GAL3ST2Q9H3Q3 398 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 GPN1Q9HCN4 374 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-208ENST00000553868 TAS2R3Q9NYW6 316 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 DUX4Q9UBX2 424 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 ZNF69Q9UC07 566 aa11.92□□□□□ -0.5
SHMT2-208ENST00000553868 C14orf166Q9Y224 244 aaKnown RBP11.92□□□□□ -0.5
SHMT2-208ENST00000553868 LINC00312Q9Y6C7 94 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms