RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 CYB561P49447 251 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 PAX5Q02548 391 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 C1orf194Q5T5A4 169 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 LEMD1Q68G75 181 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 C16orf54Q6UWD8 224 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 P4HA3Q7Z4N8 544 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 CMTM1Q8IZ96 169 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 KIR2DL5AQ8N109 375 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 DYRK2Q92630 601 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 C10orf35Q96D05 121 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 MSI2Q96DH6 328 aaKnown RBP10.49□□□□□ -0.73
SHMT2-207ENST00000553837 THOC3Q96J01 351 aaKnown RBP10.49□□□□□ -0.73
SHMT2-207ENST00000553837 SIGLEC12Q96PQ1 595 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 FOXB1Q99853 325 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 FAAP24Q9BTP7 215 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 OR2H1Q9GZK4 316 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 LIME1Q9H400 295 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 SDF2L1Q9HCN8 221 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 IGSF23A1L1A6 192 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 ATXN7O15265 892 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-207ENST00000553837 TCF21O43680 179 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 ZNF205O95201 554 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 CEACAM1P13688 526 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 RRADP55042 308 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 ZNF92Q03936 586 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 FAM90A2PQ658T7 463 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 NCR3LG1Q68D85 454 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 ZNF880Q6PDB4 577 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 BRICD5Q6PL45 260 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 SSX7Q7RTT5 188 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 TMEM18Q96B42 140 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 C11orf1Q9H5F2 150 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 CBLN4Q9NTU7 201 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 CISD1Q9NZ45 108 aaKnown RBP10.49□□□□□ -0.73
SHMT2-207ENST00000553837 SH3BGRL2Q9UJC5 107 aa10.49□□□□□ -0.73
SHMT2-207ENST00000553837 AHCTF1Q8WYP5 2266 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 NEURL1O76050 574 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 CDS2O95674 445 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 PPBPP02775 128 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 OMGP23515 440 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 MPLP40238 635 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 PDLIM4P50479 330 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 TMEM42Q69YG0 159 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 GCNT2Q8N0V5 402 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 OR5T1Q8NG75 326 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 RNASE8Q8TDE3 154 aaKnown RBP10.48□□□□□ -0.73
SHMT2-207ENST00000553837 EXTL1Q92935 676 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 CALHM2Q9HA72 323 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 GNG13Q9P2W3 67 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 FREM1Q5H8C1 2179 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 hCG_38984A0A1B0GV85 526 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 DLL1O00548 723 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 MMP7P09237 267 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-207ENST00000553837 NKX2-1P43699 371 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-207ENST00000553837 FOXG1P55316 489 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-207ENST00000553837 VAMP2P63027 116 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 PIGYQ3MUY2 71 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 PHLDA2Q53GA4 152 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 TSPO2Q5TGU0 170 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 CDCP2Q5VXM1 449 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 TGIF2LYQ8IUE0 185 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 H1FOOQ8IZA3 346 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-207ENST00000553837 TMEM252Q8N6L7 170 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 OR5L1Q8NGL2 311 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 OR5C1Q8NGR4 320 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 TMEM171Q8WVE6 324 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 PYGO2Q9BRQ0 406 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 COL25A1Q9BXS0 654 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-207ENST00000553837 SEPSECSQ9HD40 501 aaKnown RBP10.48□□□□□ -0.73
SHMT2-207ENST00000553837 SLC2A9Q9NRM0 540 aa10.48□□□□□ -0.73
SHMT2-207ENST00000553837 LYRM2Q9NU23 88 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-207ENST00000553837 NCOR1O75376 2440 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 PPP5D1E7EU14 171 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 PHF1O43189 567 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-207ENST00000553837 OR4A8P0C604 315 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 MDKP21741 143 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-207ENST00000553837 BRS3P32247 399 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 OPRM1P35372 400 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 FXYD4P59646 89 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 SRYQ05066 204 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 DAZAP2Q15038 168 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-207ENST00000553837 PDCD1Q15116 288 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 Q6ZPA2 131 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 CCDC71LQ8N9Z2 235 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 SPSB1Q96BD6 273 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 P2RX4Q99571 388 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 CRIM1Q9NZV1 1036 aa10.47□□□□□ -0.73
SHMT2-207ENST00000553837 A6NNC1 897 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 PROB1E7EW31 1015 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 NRASP01111 189 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 IL6RP08887 468 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-207ENST00000553837 GLI4P10075 376 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 KLF3P57682 345 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-207ENST00000553837 SRPXP78539 464 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 BAXQ07812 192 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 C9orf135Q5VTT2 229 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 BTNL3Q6UXE8 466 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 ASCL4Q6XD76 172 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 ZNF66Q6ZN08 573 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 MRPL41Q8IXM3 137 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms