RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SDK2Q58EX2 2172 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 MYH11P35749 1972 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 MN1Q10571 1320 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-210ENST00000553693 PCNX1Q96RV3 2341 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 A0A1W2PRG6 482 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 TMEM223A0PJW6 202 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 COLCA2A8K830 154 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 K7EN84 100 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 M0R1B8 84 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 KPNA3O00505 521 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-210ENST00000553693 PSPHP1O15172 72 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 CALUO43852 315 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-210ENST00000553693 REM1O75628 298 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 RP2O75695 350 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 TNFAIP8O95379 198 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 IGLV3-27P01718 113 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 APCSP02743 223 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 OCMP0CE72 109 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-210ENST00000553693 PET100P0DJ07 73 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 IL1RNP18510 177 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 XKP51811 444 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 C2orf80Q0P641 193 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 INCA1Q0VD86 236 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 DYNC1I2Q13409 638 aaKnown RBP1.95□□□□□ -2.1
SCFD1-210ENST00000553693 PNOCQ13519 176 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 COTL1Q14019 142 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 MAD2L1BPQ15013 274 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-210ENST00000553693 ELOCQ15369 112 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 BSXQ3C1V8 233 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 ATP6AP1LQ52LC2 224 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 STEAP4Q687X5 459 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 CEMP1Q6PRD7 247 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-210ENST00000553693 AHSA2Q719I0 299 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 SPATA24Q86W54 205 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 RIMKLAQ8IXN7 391 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 LGI3Q8N145 548 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 Q8N976 141 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 OR4M1Q8NGD0 313 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 SERPINB11Q96P15 392 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 CHAC1Q9BUX1 264 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 DDA1Q9BW61 102 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 DRC3Q9H069 523 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 OR51B5Q9H339 312 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 METTL8Q9H825 291 aaKnown RBP1.95□□□□□ -2.1
SCFD1-210ENST00000553693 DIABLOQ9NR28 239 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 ASF1BQ9NVP2 202 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 RMND1Q9NWS8 449 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 NXT1Q9UKK6 140 aaKnown RBP1.95□□□□□ -2.1
SCFD1-210ENST00000553693 RAB22AQ9UL26 194 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 OR51B4Q9Y5P0 310 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 FADS3Q9Y5Q0 445 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 MED13LQ71F56 2210 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 SHANK1Q9Y566 2161 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 ABCA2Q9BZC7 2435 aa1.95□□□□□ -2.1
SCFD1-210ENST00000553693 ANKHD1Q8IWZ3 2542 aaKnown RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 TNRC6AQ8NDV7 1962 aaKnown RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 FBN1P35555 2871 aaKnown RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 A0A1B0GTI1 187 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 LINC01619G3V211 115 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 RNASEK-C17orf49H0YIS7 233 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 J3QT63 122 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 RGS5O15539 181 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 FABP7O15540 132 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 CRXO43186 299 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 MYO1DO94832 1006 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 ASS1P00966 412 aaKnown RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 IGHV3-11P01762 117 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 HLA-DRAP01903 254 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 IGKV4-1P06312 121 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 C1GALT1C1LP0DN25 315 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 CTSEP14091 401 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 HLA-GP17693 338 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 GALR1P47211 349 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 NUDT2P50583 147 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 UBE2E1P51965 193 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 SLC18A1P54219 525 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 RAB25P57735 213 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 TAS2R31P59538 309 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 PMVKQ15126 192 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 TRAM1Q15629 374 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 TOMM34Q15785 309 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-210ENST00000553693 GOLGA7BQ2TAP0 167 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 C6orf99Q4VX62 202 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 KRTAP13-2Q52LG2 175 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 TTC32Q5I0X7 151 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 ACTL10Q5JWF8 245 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 SYPL2Q5VXT5 272 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 CALHM3Q86XJ0 350 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 GKN2Q86XP6 184 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 FAM9CQ8IZT9 166 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 CCNYL1Q8N7R7 359 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 CCL4L1Q8NHW4 92 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 UBA3Q8TBC4 463 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 C15orf40Q8WUR7 153 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 GHSRQ92847 366 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 UBE2E2Q96LR5 201 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 ZNF488Q96MN9 340 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 METTL26Q96S19 204 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 DCUN1D5Q9BTE7 237 aa1.94□□□□□ -2.1
SCFD1-210ENST00000553693 HDHD2Q9H0R4 259 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms