RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 TMEM129A0AVI4 362 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 LRP5LA4QPB2 252 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 J3QR89 54 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 PRYO14603 147 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 TIMM23O14925 209 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 RAMP1O60894 148 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 MPZL1O95297 269 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 CD74P04233 296 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 SRD5A1P18405 259 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 TIA1P31483 386 aaKnown RBP eCLIP3.47□□□□□ -1.85
RDH11-204ENST00000553578 GUCA1AP43080 201 aaPredicted RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 LPAR6P43657 344 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 NKX2-1P43699 371 aaPredicted RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 OR1E2P47887 323 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 TAS2R43P59537 309 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 RPS4XP62701 263 aaKnown RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 ZNF776Q68DI1 518 aaPredicted RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 AGTRAPQ6RW13 159 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 SLC38A9Q8NBW4 561 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 OR4K17Q8NGC6 315 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 OR5AP2Q8NGF4 316 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 WIPF2Q8TF74 440 aaPredicted RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 ST8SIA1Q92185 356 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 PSMF1Q92530 271 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 GPR146Q96CH1 333 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 P2RX4Q99571 388 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 CD207Q9UJ71 328 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 CRLS1Q9UJA2 301 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 TRAV8-7A0A075B6U6 113 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 PPIAL4EA0A075B759 164 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 A0A087X0K7 114 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 PPIAL4CA0A0B4J2A2 164 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 H3BQ15 152 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 SLC17A3O00476 420 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 ZNF354AO60765 605 aaPredicted RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 PPIAL4FP0DN26 164 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 HKR1P10072 659 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 CD34P28906 385 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 RPS20P60866 119 aaKnown RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 INSL4Q14641 139 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 EXOSC7Q15024 291 aaKnown RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 MLF2Q15773 248 aaPredicted RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 PGGHGQ32M88 737 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 ITPRIPL2Q3MIP1 535 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 MIDNQ504T8 468 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 GCSAMLQ5JQS6 135 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 HBMQ6B0K9 141 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 AWAT2Q6E213 333 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 TCTN3Q6NUS6 607 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 RFLNAQ6ZTI6 216 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 HMGN2P46Q86SG4 172 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 BLNKQ8WV28 456 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 PPP1R1CQ8WVI7 109 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 FCAMRQ8WWV6 532 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 VSTM2LQ96N03 204 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 IL17FQ96PD4 163 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 TSSK2Q96PF2 358 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 NAA38Q9BRA0 125 aaKnown RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 TMEM204Q9BSN7 226 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 QTRT1Q9BXR0 403 aaKnown RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 SLC35B3Q9H1N7 401 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 PLEKHA3Q9HB20 300 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 ENY2Q9NPA8 101 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 DEC1Q9P2X7 70 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 AK6Q9Y3D8 172 aaKnown RBP3.47□□□□□ -1.85
RDH11-204ENST00000553578 MYO7AQ13402 2215 aa3.47□□□□□ -1.85
RDH11-204ENST00000553578 OR11H12B2RN74 326 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 SOX14O95416 240 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 CATP04040 527 aaKnown RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 ZNF19P17023 458 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 CFHR2P36980 270 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 LINC00310P59036 64 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 LCN2P80188 198 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 COL10A1Q03692 680 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 GAGE5Q13069 117 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 GAGE6Q13070 117 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 ZNF345Q14585 488 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 CST6Q15828 149 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 DUSP5Q16690 384 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 CLEC12BQ2HXU8 276 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 MPV17LQ2QL34 196 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 SPATA45Q537H7 98 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 DOK3Q7L591 496 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 MDGA2Q7Z553 956 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 LILRA3Q8N6C8 439 aaPredicted RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 OR11H1Q8NG94 326 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 OR11H2Q8NH07 326 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 RNF138Q8WVD3 245 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 CLDN23Q96B33 292 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 Q96MF0 132 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 NIPSNAP3BQ9BS92 247 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 SAMD10Q9BYL1 202 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 ISG20L2Q9H9L3 353 aaKnown RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 ESM1Q9NQ30 184 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 HSPB8Q9UJY1 196 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 WNT6Q9Y6F9 365 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 CEP192Q8TEP8 1941 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 MYOFQ9NZM1 2061 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 ZNF860A6NHJ4 632 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 PIPP12273 146 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms