RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ZNF880Q6PDB4 577 aa18.38■□□□□ 0.53
TDP1-206ENST00000553569 TMEM219Q86XT9 240 aa18.38■□□□□ 0.53
TDP1-206ENST00000553569 OR52L2PQ8NGH6 319 aa18.38■□□□□ 0.53
TDP1-206ENST00000553569 OR5H6Q8NGV6 325 aa18.38■□□□□ 0.53
TDP1-206ENST00000553569 TCF19Q9Y242 345 aa18.38■□□□□ 0.53
TDP1-206ENST00000553569 KCNK7Q9Y2U2 307 aa18.38■□□□□ 0.53
TDP1-206ENST00000553569 TRBV6-6A0A0A6YYG2 114 aa18.37■□□□□ 0.53
TDP1-206ENST00000553569 MFNGO00587 321 aa18.37■□□□□ 0.53
TDP1-206ENST00000553569 SLC31A2O15432 143 aa18.37■□□□□ 0.53
TDP1-206ENST00000553569 HIST1H1DP16402 221 aaKnown RBP18.37■□□□□ 0.53
TDP1-206ENST00000553569 MDKP21741 143 aaPredicted RBP18.37■□□□□ 0.53
TDP1-206ENST00000553569 ARHGDIBP52566 201 aa18.37■□□□□ 0.53
TDP1-206ENST00000553569 IL1F10Q8WWZ1 152 aa18.37■□□□□ 0.53
TDP1-206ENST00000553569 GALMQ96C23 342 aa18.37■□□□□ 0.53
TDP1-206ENST00000553569 CHST1O43916 411 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 CD24P25063 80 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 PPP1CCP36873 323 aaKnown RBP18.36■□□□□ 0.53
TDP1-206ENST00000553569 RPS19P39019 145 aaKnown RBP18.36■□□□□ 0.53
TDP1-206ENST00000553569 DYNLT3P51808 116 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 VBP1P61758 197 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 HLA-DRB3P79483 266 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 DIAPH2-AS1Q14236 149 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 CCDC144NLQ6NUI1 221 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 OR4F5Q8NH21 305 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 NAA50Q9GZZ1 169 aaKnown RBP18.36■□□□□ 0.53
TDP1-206ENST00000553569 Q9N2K0 584 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 RHBDL2Q9NX52 303 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 JPT1Q9UK76 154 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 ETV7Q9Y603 341 aa18.36■□□□□ 0.53
TDP1-206ENST00000553569 A6NDX4 124 aa18.35■□□□□ 0.53
TDP1-206ENST00000553569 OOSP1A8MZH6 123 aa18.35■□□□□ 0.53
TDP1-206ENST00000553569 NDUFA7O95182 113 aa18.35■□□□□ 0.53
TDP1-206ENST00000553569 BRS3P32247 399 aa18.35■□□□□ 0.53
TDP1-206ENST00000553569 MNDAP41218 407 aa18.35■□□□□ 0.53
TDP1-206ENST00000553569 HTD2P86397 168 aa18.35■□□□□ 0.53
TDP1-206ENST00000553569 Q3ZCU0 254 aa18.35■□□□□ 0.53
TDP1-206ENST00000553569 CCBE1Q6UXH8 406 aaPredicted RBP18.35■□□□□ 0.53
TDP1-206ENST00000553569 LIAT1Q6ZQX7 453 aa18.35■□□□□ 0.53
TDP1-206ENST00000553569 LINC00311Q8N616 119 aa18.35■□□□□ 0.53
TDP1-206ENST00000553569 ZNF439Q8NDP4 499 aa18.35■□□□□ 0.53
TDP1-206ENST00000553569 RAB18Q9NP72 206 aa18.35■□□□□ 0.53
TDP1-206ENST00000553569 HSD17B6O14756 317 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 IL3RAP26951 378 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 ALDH3B2P48448 385 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 SCAND1P57086 179 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 ARFRP1Q13795 201 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 MORN2Q502X0 79 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 GPR107Q5VW38 600 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 Q6ZSV7 163 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 SLC25A48Q6ZT89 311 aaKnown RBP18.34■□□□□ 0.53
TDP1-206ENST00000553569 GPR141Q7Z602 305 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 CROCCP3Q8IVE0 287 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 C3orf56Q8N813 242 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 C8orf31Q8N9H6 132 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 SLC25A38Q96DW6 304 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 OCSTAMPQ9BR26 566 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 PITPNC1Q9UKF7 332 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 MGAT4AQ9UM21 535 aa18.34■□□□□ 0.53
TDP1-206ENST00000553569 SERPINE3A8MV23 424 aa18.33■□□□□ 0.52
TDP1-206ENST00000553569 TFAP2AP05549 437 aa18.33■□□□□ 0.52
TDP1-206ENST00000553569 FCGR3AP08637 254 aa18.33■□□□□ 0.52
TDP1-206ENST00000553569 REG1BP48304 166 aa18.33■□□□□ 0.52
TDP1-206ENST00000553569 ZNF134P52741 427 aa18.33■□□□□ 0.52
TDP1-206ENST00000553569 CT45A1Q5HYN5 189 aa18.33■□□□□ 0.52
TDP1-206ENST00000553569 ANKRD13BQ86YJ7 626 aa18.33■□□□□ 0.52
TDP1-206ENST00000553569 CT45A3Q8NHU0 189 aa18.33■□□□□ 0.52
TDP1-206ENST00000553569 ABHD14AQ9BUJ0 271 aa18.33■□□□□ 0.52
TDP1-206ENST00000553569 BEX1Q9HBH7 125 aa18.33■□□□□ 0.52
TDP1-206ENST00000553569 ELF5Q9UKW6 265 aaPredicted RBP18.33■□□□□ 0.52
TDP1-206ENST00000553569 A0A1W2PPI3 338 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 TIMM23O14925 209 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 SCGNO76038 276 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 RGS11O94810 467 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 GABARAPO95166 117 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 SCTP09683 121 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 RAB7AP51149 207 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 CDNFQ49AH0 187 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 FBLN7Q53RD9 439 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 STEAP3Q658P3 488 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 DRAM1Q8N682 238 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 OR56B4Q8NH76 319 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 CAPSLQ8WWF8 208 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 MAFIPQ8WZ33 124 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 PHF21AQ96BD5 680 aa18.32■□□□□ 0.52
TDP1-206ENST00000553569 STAB1Q9NY15 2570 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 YPEL1O60688 119 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 TALDO1P37837 337 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 ARL6IP1Q15041 203 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 IZUMO1Q8IYV9 350 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 OR8H3Q8N146 312 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 LYG1Q8N1E2 194 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 OR4C13Q8NGP0 309 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 SLC25A46Q96AG3 418 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 YPEL2Q96QA6 119 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 OR1A1Q9P1Q5 309 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 SLC23A1Q9UHI7 598 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 ZNF230Q9UIE0 474 aaPredicted RBP18.31■□□□□ 0.52
TDP1-206ENST00000553569 SPATA2Q9UM82 520 aa18.31■□□□□ 0.52
TDP1-206ENST00000553569 TMEM235A6NFC5 223 aa18.3■□□□□ 0.52
TDP1-206ENST00000553569 POM121CA8CG34 1229 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms