RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 LINC00527Q9UJ94 153 aa2.8□□□□□ -1.96
ATXN3-217ENST00000553287 IFT52Q9Y366 437 aa2.8□□□□□ -1.96
ATXN3-217ENST00000553287 CAB39Q9Y376 341 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-217ENST00000553287 STRAPQ9Y3F4 350 aaKnown RBP2.8□□□□□ -1.96
ATXN3-217ENST00000553287 TIMM10BQ9Y5J6 103 aa2.8□□□□□ -1.96
ATXN3-217ENST00000553287 KPTNQ9Y664 436 aa2.8□□□□□ -1.96
ATXN3-217ENST00000553287 DNAH10Q8IVF4 4471 aa2.8□□□□□ -1.96
ATXN3-217ENST00000553287 IGKV2D-24A0A075B6R9 120 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 A6NDX4 124 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 E9PBE3 544 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 RER1O15258 196 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 SNAI2O43623 268 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 LY6G6CO95867 125 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 IGF2P01344 180 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 IGHV3-48P01763 117 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 FGF4P08620 206 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 CST2P09228 141 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 ASAH2BP0C7U1 165 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 GSTT2P0CG29 244 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 GSTT2BP0CG30 244 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 HTR1FP30939 366 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 CTRLP40313 264 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 CEBPDP49716 269 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-217ENST00000553287 UBE2E1P51965 193 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 CRISP3P54108 245 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 RGS8P57771 180 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-217ENST00000553287 NCALDP61601 193 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 OR8G1Q15617 311 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 SSX2Q16385 188 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 CCDC92Q53HC0 331 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-217ENST00000553287 C10orf128Q5T292 105 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 FAM27BQ5VT28 67 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 ANXA8L1Q5VT79 327 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 C8orf74Q6P047 294 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 RNF165Q6ZSG1 346 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 NANOGNBQ7Z5D8 188 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 WDR86Q86TI4 376 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 BATF2Q8N1L9 274 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 TMEM252Q8N6L7 170 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 NATD1Q8N6N6 113 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 C20orf203Q8NBC4 194 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 OR2T33Q8NG76 320 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 OR4M1Q8NGD0 313 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 OR11L1Q8NGX0 322 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 OR2AE1Q8NHA4 323 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 MARCH1Q8TCQ1 289 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 TCP10LQ8TDR4 215 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 DUS3LQ96G46 650 aaKnown RBP2.79□□□□□ -1.96
ATXN3-217ENST00000553287 OR52E6Q96RD3 313 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 MCHR1Q99705 422 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 COMMD4Q9H0A8 199 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 RANBP3Q9H6Z4 567 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-217ENST00000553287 EDA2RQ9HAV5 297 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 TMEM27Q9HBJ8 222 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 RETNQ9HD89 108 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 ZNF391Q9UJN7 358 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 PYCARDQ9ULZ3 195 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 PRPF19Q9UMS4 504 aaKnown RBP2.79□□□□□ -1.96
ATXN3-217ENST00000553287 HILPDAQ9Y5L2 63 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 N6AMT1Q9Y5N5 214 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 TSSC4Q9Y5U2 329 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-217ENST00000553287 WSB1Q9Y6I7 421 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 KMT2AQ03164 3969 aa2.79□□□□□ -1.96
ATXN3-217ENST00000553287 IGHV1OR15-1A0A075B7D0 117 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 TRAV38-1A0A0B4J264 116 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 A0A1W2PRG6 482 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 TRIM64CA6NLI5 447 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 IQCF6A8MYZ5 107 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 C5orf58C9J3I9 102 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 H3BSA7 217 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 COPEO14579 308 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 RFXANKO14593 260 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 RIPK2O43353 540 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 SGCEO43556 437 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 NDUFB3O43676 98 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 DEDDO75618 318 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 KRT75O95678 551 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 CCL3L1P16619 93 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 BGNP21810 368 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 CD200P41217 278 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 DGUOKQ16854 277 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 ZNF181Q2M3W8 571 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 RSPO1Q2MKA7 263 aaPredicted RBP2.78□□□□□ -1.96
ATXN3-217ENST00000553287 C2orf76Q3KRA6 126 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 CCDC153Q494R4 210 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 ABCA11PQ4W5N1 156 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 OR8G2PQ6IF36 304 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 TTC33Q6PID6 262 aaPredicted RBP2.78□□□□□ -1.96
ATXN3-217ENST00000553287 METAP1DQ6UB28 335 aaPredicted RBP2.78□□□□□ -1.96
ATXN3-217ENST00000553287 UNQ9370/PRO34162Q6UXP9 181 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 FBXW12Q6X9E4 464 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 DPPA2Q7Z7J5 298 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 LCA5Q86VQ0 697 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 NKAIN4Q8IVV8 208 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 Q8N2B8 174 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 SUMF2Q8NBJ7 301 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 GPR32P1Q8NGA4 272 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 OR9I1Q8NGQ6 314 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 OR1F12Q8NHA8 337 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 ACMSDQ8TDX5 336 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms