RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 SNAPC5O75971 98 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 MPC2O95563 127 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 TNFRSF1AP19438 455 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 GNRHRP30968 328 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 NUP62P37198 522 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-210ENST00000553116 CEACAM6P40199 344 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 KCNJ3P48549 501 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 LUMP51884 338 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-210ENST00000553116 ZNF880Q6PDB4 577 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 LGI3Q8N145 548 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 ZCCHC24Q8N2G6 241 aaKnown RBP6.94□□□□□ -1.3
RAB5B-210ENST00000553116 CD177Q8N6Q3 437 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 RNASE6Q93091 150 aaKnown RBP6.94□□□□□ -1.3
RAB5B-210ENST00000553116 GALMQ96C23 342 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 OR10C1Q96KK4 312 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 NMES1Q9C002 83 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 HIVEP3Q5T1R4 2406 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 TRBV6-7A0A0A0MS04 114 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 C3orf85A0A1B0GTC6 90 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-210ENST00000553116 KANTRA0A1W2PQU2 76 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 OOEPA6NGQ2 149 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 MPPED1O15442 326 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 IFNA7P01567 189 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 PET100P0DJ07 73 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 GRNP28799 593 aaKnown RBP6.94□□□□□ -1.3
RAB5B-210ENST00000553116 GLIPR1P48060 266 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 SMCO1Q147U7 214 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 LTC4SQ16873 150 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 SLC35E4Q6ICL7 350 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 OR10V1Q8NGI7 309 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 OR51H1Q8NH63 302 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 C2orf50Q96LR7 162 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 CABLES2Q9BTV7 478 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 EGLN1Q9GZT9 426 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 GCM1Q9NP62 436 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 KCNJ16Q9NPI9 418 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 A0A1B0GWJ7 208 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 LRRC30A6NM36 301 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 LMO1P25800 156 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 EXOSC2Q13868 293 aaKnown RBP6.94□□□□□ -1.3
RAB5B-210ENST00000553116 TMEM187Q14656 261 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 TMEM268Q5VZI3 342 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 GGNBP1Q5YKI7 109 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 PCSK4Q6UW60 755 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 TEX261Q6UWH6 196 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 LIAT1Q6ZQX7 453 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 ZNF695Q8IW36 515 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 OR1L1Q8NH94 360 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 RNASE11Q8TAA1 199 aaKnown RBP6.94□□□□□ -1.3
RAB5B-210ENST00000553116 NEUROG1Q92886 237 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 COQ2Q96H96 371 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 CXorf58Q96LI9 332 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 SAP30LQ9HAJ7 183 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 U3KQ87 197 aa6.94□□□□□ -1.3
RAB5B-210ENST00000553116 TUBAL3A6NHL2 446 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 FAM74A7A6NL05 159 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 C12orf77C9JDV5 145 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 TUSC2O75896 110 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 OR8U9P0C7N5 309 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 RNF224P0DH78 156 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 RPA2P15927 270 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 FAM74A3Q4VXF1 159 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 H1FOOQ8IZA3 346 aaPredicted RBP6.93□□□□□ -1.3
RAB5B-210ENST00000553116 ZNRF1Q8ND25 227 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 OR8U1Q8NH10 309 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 ARL11Q969Q4 196 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 GALNT14Q96FL9 552 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 TP53RKQ96S44 253 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 LSM5Q9Y4Y9 91 aaKnown RBP6.93□□□□□ -1.3
RAB5B-210ENST00000553116 DSCAMO60469 2012 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 IGKV1D-17A0A075B6S4 117 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 C17orf100A8MU93 164 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.93□□□□□ -1.3
RAB5B-210ENST00000553116 HBZP02008 142 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 SSTR5P35346 364 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 SRPXP78539 464 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 ADORA2A-AS1P86434 159 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 SRSF4Q08170 494 aaKnown RBP6.93□□□□□ -1.3
RAB5B-210ENST00000553116 RAB32Q13637 225 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 NCMAPQ5T1S8 102 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 LYZL2Q7Z4W2 148 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 FAM90A1Q86YD7 464 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 RFESDQ8TAC1 157 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 MBNL3Q9NUK0 354 aaKnown RBP6.93□□□□□ -1.3
RAB5B-210ENST00000553116 MAB21L2Q9Y586 359 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 IGHV3-43A0A0B4J1X8 118 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 SPINT2O43291 252 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 KCNAB3O43448 404 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 SPDEFO95238 335 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 IGHV3-43DP0DP04 118 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 GATA4P43694 442 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 HMGN3Q15651 99 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 OR13A1Q8NGR1 328 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 GLYATL2Q8WU03 294 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 DIRC2Q96SL1 478 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 OR2S2Q9NQN1 319 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 UBQLN2Q9UHD9 624 aa6.93□□□□□ -1.3
RAB5B-210ENST00000553116 RAI1Q7Z5J4 1906 aaPredicted RBP6.92□□□□□ -1.3
RAB5B-210ENST00000553116 YLPM1P49750 1951 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms